BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0073.p         (108 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1088 [PR] COG2146 Ferredoxin subunits of nitrite reductase an...    99   2e-21
YPO0928 [PR] COG2146 Ferredoxin subunits of nitrite reductase an...    88   5e-18
SMc01993 [PR] COG2146 Ferredoxin subunits of nitrite reductase a...    81   5e-16
mlr4999 [PR] COG2146 Ferredoxin subunits of nitrite reductase an...    75   3e-14
SMb20819 [PR] COG2146 Ferredoxin subunits of nitrite reductase a...    74   8e-14

>RSc1088 [PR] COG2146 Ferredoxin subunits of nitrite reductase and
          ring-hydroxylating dioxygenases Rso Ralstonia
          solanacearum
          Length = 103

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 62/91 (68%)

Query: 7  TWHEAAALSALNEGEPYGIEIGRHHVALYRVGNEYYATSNICTHAEALLSDGILEGCEIE 66
          TW +   ++ L + +   ++ G   +ALYRV  E +AT N+CTH  A L DG L+G EIE
Sbjct: 4  TWFKLIPVADLPDDDVIAVDAGEAEIALYRVAGEVFATDNLCTHGHARLCDGFLDGHEIE 63

Query: 67 CPLHMGRFDIRTGEALTSPVEIDIRTYPVRV 97
          CPLH G+FD+R+G+A+  P+  D+RTYP+++
Sbjct: 64 CPLHQGKFDVRSGKAMCEPLSRDVRTYPIKI 94


>YPO0928 [PR] COG2146 Ferredoxin subunits of nitrite reductase and
           ring-hydroxylating dioxygenases Ype Yersinia pestis
          Length = 106

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%)

Query: 8   WHEAAALSALNEGEPYGIEIGRHHVALYRVGNEYYATSNICTHAEALLSDGILEGCEIEC 67
           W     ++ +    P+  + G + V +Y V  EY+A  +IC HA ALLS GI +G  IEC
Sbjct: 3   WFSVCKVNDIKPDFPFSAQAGNNRVGIYLVEGEYFAMEDICPHAYALLSQGINDGEIIEC 62

Query: 68  PLHMGRFDIRTGEALTSPVEIDIRTYPVRVAGDRLEVCL 106
           PLH   F++RTG+ L  P + D+ TY VR+ GD+++V L
Sbjct: 63  PLHGALFNVRTGQCLREPGDRDLNTYAVRINGDQIDVNL 101


>SMc01993 [PR] COG2146 Ferredoxin subunits of nitrite reductase and
          ring-hydroxylating dioxygenases Sme Sinorhizobium
          meliloti
          Length = 109

 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 47/70 (67%)

Query: 28 GRHHVALYRVGNEYYATSNICTHAEALLSDGILEGCEIECPLHMGRFDIRTGEALTSPVE 87
          GR         ++YYAT +ICTH  A +SDG +EG  +ECP H G FD RTGEAL  PV 
Sbjct: 28 GRSFAIFRTADDQYYATDDICTHEYAHISDGFVEGTTVECPRHAGCFDFRTGEALNPPVC 87

Query: 88 IDIRTYPVRV 97
          +++RT+PV+V
Sbjct: 88 VNLRTFPVKV 97


>mlr4999 [PR] COG2146 Ferredoxin subunits of nitrite reductase and
           ring-hydroxylating dioxygenases Mlo Mesorhizobium loti
          Length = 104

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)

Query: 8   WHEAAALSALNEGEPYGIEIGRHHVALYRV-GNEYYATSNICTHAEALLSDGILEGCEIE 66
           W EA A   ++E +    + G    A+YR   +EY+AT  +CTH +  L+DG++    IE
Sbjct: 4   WVEACATDDIDEEDVMRFDHGGRTFAIYRSPDDEYFATDGLCTHEKVHLADGLVMDDIIE 63

Query: 67  CPLHMGRFDIRTGEALTSPVEIDIRTYPVRVAGDRLEV 104
           CP H GRF+ +TG A  +PV ++++TYPV+V   ++ V
Sbjct: 64  CPKHNGRFNYKTGAARGAPVCVNLKTYPVKVDAGKVLV 101


>SMb20819 [PR] COG2146 Ferredoxin subunits of nitrite reductase and
          ring-hydroxylating dioxygenases Sme Sinorhizobium
          meliloti
          Length = 105

 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 7  TWHEAAALSALNEGEPYGIEIGRHHVALYRV-GNEYYATSNICTHAEALLSDGILEGCEI 65
           W E  A   ++E +    +      A+YR   +EY+AT  +CTH +  L+DG++ G  I
Sbjct: 4  NWVEVCAAEEIDEEDVVRFDHEGRTFAVYRSPDDEYFATDGLCTHEQIHLADGLVMGDII 63

Query: 66 ECPLHMGRFDIRTGEALTSPVEIDIRTYPVRV 97
          ECP H GRF+ +TG+A  +PV +++RTYPV+V
Sbjct: 64 ECPKHNGRFNYKTGQARGAPVCVNLRTYPVKV 95