BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0067.p (336 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb20914 [C] COG4313 Protein involved in meta-pathway of phenol ... 372 e-103 PA5325 [C] COG4313 Protein involved in meta-pathway of phenol de... 96 1e-19 RSp1468 [C] COG4313 Protein involved in meta-pathway of phenol d... 94 3e-19 mll5467 Non COG 80 7e-15 RSc1833 [C] COG4313 Protein involved in meta-pathway of phenol d... 65 2e-10 >SMb20914 [C] COG4313 Protein involved in meta-pathway of phenol degradation Sme Sinorhizobium meliloti Length = 336 Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/324 (56%), Positives = 232/324 (71%), Gaps = 2/324 (0%) Query: 4 VKNRKRAALGIAGAIALSAMPQAAFADEGGISFWLPGNFGSLAAVPGTPGWSWATVYYHT 63 + + RA ++ A + +AA ADE GISFWLPG +GS AA PG PGWS+A+V+YH Sbjct: 14 IGSATRATALVSLATVCMGINEAA-ADEAGISFWLPGLYGSFAAAPGEPGWSFASVFYHP 72 Query: 64 EVSSAAGARFPRGGRIDLGIGGQGDLAIFGPTYTFAVPGLGAVGSVSLLGFGGRNNASVA 123 VS+ AG FPRGG +D+GI G+G++ FGPTYTF P GA +VSLL GRN+A V Sbjct: 73 SVSAGAGTSFPRGGGVDVGIEGRGEIIAFGPTYTFDQPLWGAQAAVSLLAVAGRNSACVD 132 Query: 124 ASLTGPLGNTINLSRSEALTDIGDVIPQVTLKWNKGVNNIMVYATGDVPVGAYDPVRLAN 183 A+L GP G TI+ R E+ T +GD++PQ TLKWN+GVNN M Y TGD+P+GAYDP RLAN Sbjct: 133 ATLAGPGGGTISGERCESYTGVGDLLPQFTLKWNEGVNNYMTYVTGDIPIGAYDPDRLAN 192 Query: 184 IGIGHGAMDFGGGYTYFDPHSGNEFSGVVGFTYNFKNPDTQYQSGVDFHFDWGASHFFTP 243 G+GHGA+D G GYTY +P +G EFS V G TYNF+NPDT YQ+G+D H DW AS F Sbjct: 193 TGLGHGAIDGGVGYTYLNPETGREFSIVGGMTYNFENPDTDYQNGIDGHVDWAASQFLNE 252 Query: 244 NVQLGLVGYVMQQISDDTGPGATLGGFRSRIAGVGPQVGFMFPVGDMQ-GYLNIKGYKEF 302 +V +G+VGY QQ++ D+G GATLG F+SR+ G+GPQVG+ F D GY+N+KGY EF Sbjct: 253 HVHVGVVGYAFQQLTGDSGEGATLGDFKSRVFGIGPQVGYKFDFDDKTAGYVNLKGYYEF 312 Query: 303 AAENRPEGWNTWVTFAISPAPPAP 326 A+NRPEGWN W+T A SP P Sbjct: 313 GAKNRPEGWNVWLTLAFSPRAEKP 336 >PA5325 [C] COG4313 Protein involved in meta-pathway of phenol degradation Pae Pseudomonas aeruginosa Length = 316 Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 95/330 (28%), Positives = 134/330 (40%), Gaps = 39/330 (11%) Query: 7 RKRAALGIAGAIALSAMPQAAFADEGGISFWLPGNFGSLAA---VPGTPGWSWA-TVYY- 61 R L +A + L A+ A EGG+ PG G V P +A VYY Sbjct: 5 RPHRPLRLAACVTL-AVSCCTHASEGGVDNIGPGTDGFFTLPLDVDNLPDHMFAFNVYYN 63 Query: 62 HTEVSSAAGARFPRGGRI-DLGIGGQGDLAIFGPTYTFAVPGLGAVGSVSLLGFGGRNNA 120 H E + F GG++ D+ I +P L + + + FGGR Sbjct: 64 HYEARKLNISSF--GGKVSDVKISSDA-----------IIPRLDYLSPLRI--FGGRLGG 108 Query: 121 SVAASLTGPLGNTINLSRSEALTDIGDVIPQVTLKWNKGVNNIMVYATG-DVPVGAYDPV 179 +A LS + +GD + W+ G + + A VP G YD Sbjct: 109 YIAQPYLRQRVAAFGLS--DERESMGDTTFAPIILWDMGKDLTLAAAVEVTVPTGKYDAE 166 Query: 180 RLANIGIGHGAMDFGGGYTYFDPHSGNEFSGVVGFTYNFKNPDTQYQSGVDFHFDWGASH 239 RLAN +T+ P E S +++N +N DT Y+SG FHFD+ AS+ Sbjct: 167 RLANTSNNFYTYKPLFSFTWL-PTERTELSLKATYSFNMENHDTDYRSGQIFHFDYSASY 225 Query: 240 FFTPNVQLGLVGYVMQQISDDTGPGATL----------GGFRSRIAGVGPQVGFMFPVGD 289 T N++LGL GY ++Q +DD G T+ G R ++ +GP V F Sbjct: 226 RVTDNLRLGLNGYYLKQTTDDKQNGETVRVFGFGEEVDDGVRGQVFAIGPAVHLTFL--- 282 Query: 290 MQGYLNIKGYKEFAAENRPEGWNTWVTFAI 319 I+ KEF ENRPEG W I Sbjct: 283 KYASAEIRWAKEFDVENRPEGDMLWAKLTI 312 >RSp1468 [C] COG4313 Protein involved in meta-pathway of phenol degradation Rso Ralstonia solanacearum Length = 311 Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 109/218 (50%), Gaps = 13/218 (5%) Query: 102 GLGAVGSVSLLGFGGRNNAS-VAASLTGPLGNTI-----NLSRSEALTDIGDV-IPQVTL 154 GL V + L GG+ S VA L+ L I LS+S T +GD+ + +T+ Sbjct: 87 GLAVVKTTRLSLLGGKYGWSFVAPVLSMKLDLGIPTPAGRLSQSGRNTALGDLQVSPITV 146 Query: 155 KWNKGVNNIMVYA--TGDVPVGAYDPVRLANIGIGHGAMDFGGGYTYFDPHSGNEFSGVV 212 W N+ V A +P G+YD RL N G+ H + +TY G E S + Sbjct: 147 SWMPA-QNLFVNAALMLQLPTGSYDRNRLVNAGMNHWVVSPTVAFTYITSF-GGELSSNI 204 Query: 213 GFTYNFKNPDTQYQSGVDFHFDWGASHFFTPNVQLGLVGYVMQQISDDTGPGATLGGFRS 272 N +N DT Y+SG+++ ++ P +G+ GY QQ++DDT G T+ G R+ Sbjct: 205 QLNVNGRNRDTDYRSGIEYQHEFAIGQHIGP-WTVGIGGYYSQQLTDDTQAGKTIEGNRA 263 Query: 273 RIAGVGPQVGFMFPVGDMQGYLNIKGYKEFAAENRPEG 310 R+ +GP V F+ P G +++ YKEFAA NR +G Sbjct: 264 RVFALGPAVYFLKP-GSAWPIVSLHAYKEFAARNRAQG 300 >mll5467 Non COG Length = 319 Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 128/299 (42%), Gaps = 31/299 (10%) Query: 27 AFADEGGISFWLPGNFGSLAA--VPGTPG---WSWATVYYHTEVSSAAGARFPRG-GRID 80 A A E +LPG F A VP TPG W+ + +YYH E AG P G G + Sbjct: 26 AKATEAVAGRYLPGVFAGPGAGIVPPTPGVAYWAVSNIYYHGE----AGGDVPFGNGAVA 81 Query: 81 LGIGGQGDLAIFGPTYT--FAVPG--LGAVGSVSLLGFGGRNNASVAASLTGPLGNTINL 136 +G+ G + Y +PG AV + LG+ G A + GP G N+ Sbjct: 82 VGMTGNIWSTVLAGVYVPELHLPGNWTYAVQAAVPLGWTG------AQAEVGPFGTKQNV 135 Query: 137 SRSEALTDIGDV-IPQVTLKWNKGVNNIMVYATGDV--PVGAYDPVRLANIGIGHGAMDF 193 + +GD+ + L W+ N + A+ + P G + LA IG+ + Sbjct: 136 A------GLGDIAFAPLVLGWHNDAMNTWLSASLTITAPTGEWKQGDLAFIGLNYWTFSP 189 Query: 194 GGGYTYFDPHSGNEFSGVVGFTYNFKNPDTQYQSGVDFHFDWGASHFFTPNVQLGLVGYV 253 G+TY P G + S G N KN DT Y SG H D + T ++ +G + Sbjct: 190 AIGFTYLIPEHGLDLSAKFGVDINTKNHDTNYYSGATAHLDLSVTKNVTESLSVGGIAGF 249 Query: 254 MQQISDDTGPGA-TLGGFRSRIAGVGPQVGFMFPVGD-MQGYLNIKGYKEFAAENRPEG 310 + QI DD G A T GFR R VGP V + G+ + ++ E +NR +G Sbjct: 250 LDQIEDDRGTFADTHDGFRGRSIAVGPLVKYKAKFGESTEVDFTLRWAHEVEVKNRMKG 308 >RSc1833 [C] COG4313 Protein involved in meta-pathway of phenol degradation Rso Ralstonia solanacearum Length = 297 Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 67/148 (45%), Gaps = 6/148 (4%) Query: 172 PVGAYDPVRLANIGIGHGAMDFGGGYTYFDPHSGNEFSGVVGFTYNFKNPDTQYQSGVDF 231 P G YDP +++G + TY P N V+ + NF+N T +SG Sbjct: 154 PTGHYDPTAPSSLGKNYWTAQPLAAITYMQPTGFNGDLKVM-YDLNFRNTRTDTRSGQAI 212 Query: 232 HFDWGASHFFTPNVQLGLVGYVMQQISDDTGPGATLGGFRSRIAGVGPQVGFMFPVGDMQ 291 H D+ A LG+ GYV QQ ++D GP A G ++R VGP + + D Sbjct: 213 HADYSAGWGIGNGWVLGVGGYVYQQTTNDQGPAAAQG--KARALAVGPSIRY---ANDRG 267 Query: 292 GYLNIKGYKEFAAENRPEGWNTWVTFAI 319 L +K KEF NRP G +V +I Sbjct: 268 WLLTVKWQKEFEVRNRPSGSQFYVKASI 295