BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0065.p (496 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMa1060 [S] COG5361 Uncharacterized conserved protein Sme Sinorh... 384 e-106 SMa0610 [S] COG5361 Uncharacterized conserved protein Sme Sinorh... 230 7e-60 MA2325 [S] COG5361 Uncharacterized conserved protein Mac Methano... 191 4e-48 SMc01184 [S] COG5361 Uncharacterized conserved protein Sme Sinor... 172 2e-42 SMa0609 [S] COG5361 Uncharacterized conserved protein Sme Sinorh... 146 9e-35 >SMa1060 [S] COG5361 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 465 Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust. Identities = 215/471 (45%), Positives = 292/471 (61%), Gaps = 18/471 (3%) Query: 28 VNRRQTLLGAAALLTSGLLASSRAWAQSVSADDARAIAKDAYIYGFPLVDSYRVQYSYFV 87 + RR L G AL+ +L++ A+AQ DD RA+A++AYIY +P+V +Y Y Y + Sbjct: 11 MKRRILLQGTTALM---VLSALPAFAQ----DDIRAVAREAYIYTYPMVKNYLTMYQYAL 63 Query: 88 DRGGAEYKAPWNTIFNNARVYTPDDKAIQTPNSDTPYSYVGADLRAEPIVFTVPAVEKGR 147 D GG++YK P NT+ + ARVYTP+D AI TPNSDTPYS++ DLRAEP+V T+P +EK R Sbjct: 64 DPGGSQYKGPLNTLVSIARVYTPEDTAIITPNSDTPYSFIVFDLRAEPVVVTMPPIEKDR 123 Query: 148 YYSLQFIDMYTFDFAYVGSRATGNGAGSYLLAGPTWKGQKPKGIRKVIRCETEFAFVLYR 207 YYSLQ ID+YT + Y G+R GNG G +L+ GP WKG PKGI++VI T A + R Sbjct: 124 YYSLQLIDLYTNNVDYPGTRVDGNGGGDFLITGPGWKGDVPKGIKRVIEMPTTLALGIIR 183 Query: 208 TQLFNPGDVENVKKIQAGYKVQTLSQFLGKPAPAAAPEVAFIKPITAEQERNALEFFGIL 267 TQLF+P D+E VK+IQA YK LS + G PAPAA P + + + E +++ I Sbjct: 184 TQLFSPDDLEKVKQIQARYKAAVLSAYAGAPAPAAPPSIDW---LLISDELMVTDYWSIA 240 Query: 268 NFLLQFCPTHPSEKALMARFARIGVGVGKPFDANSLPPETRKALQDGMADAWKAFAEFKE 327 FLLQF P + ++A A++G+ + L PET +++ A A KE Sbjct: 241 AFLLQFAPPYSGDEAQRENLAKLGIRDRGVWPGTDLSPETVALMKE------VAVATEKE 294 Query: 328 TQLDTGKVS-SADGFGTRAHLKNDYMQRMSAAVLGIYGNAKEEAIYPAYFVDSDKRKLDG 386 + + +++ S+ FGT +K +M R +AA GIYGN+ +EA+Y Y D+ K LDG Sbjct: 295 IRDEAARLTDSSKIFGTPEFMKGRFMVRAAAAQGGIYGNSVQEALYVIYAFDAQKAPLDG 354 Query: 387 -ANRYTMRFAPGQLPPANAFWSLTMYQLPASLLYANPLNRYLINSSMLPNLKRDADGGIT 445 RY + F P LPP +AFWSLTMY L NP++RYLINS ML LK+ G I Sbjct: 355 KTGRYKLTFTPRTLPPVDAFWSLTMYDRQNQFLVDNPIDRYLINSPMLAGLKKSNKGEIV 414 Query: 446 LYVQNESPGQDKEANWLPAPKGPFFAVMRLYWPKPAARSGQWKAPPMQQSS 496 LY+Q ESPG + E+NWLPAP F+ VMRLY P+ A G+W PP++ S Sbjct: 415 LYLQRESPGAELESNWLPAPSEIFYVVMRLYLPRAEALDGRWAPPPIEALS 465 >SMa0610 [S] COG5361 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 286 Score = 230 bits (586), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 130/293 (44%), Positives = 173/293 (59%), Gaps = 23/293 (7%) Query: 218 NVKKIQAGYKVQTLSQFLGKPAPAAAPEVAFIKPITAEQERNALEFFGILNFLLQFCPTH 277 NV+K+QAGYK Q LS FL +PAP AAPE+AF+ TA + N FF L+ LQF P Sbjct: 3 NVEKVQAGYKAQPLSAFLKQPAPTAAPEIAFVPATTAGIKDN---FFQYLDAALQFVPET 59 Query: 278 PSEKALMARFARIGVGVGKPFDANSLPPETRKAL------QDGMADAWKAFAEFKETQLD 331 + A+ A+ A+IG+G GK F+ L E + + D + W A ++ Sbjct: 60 LRDNAIRAKLAKIGIGPGKTFEFKELSLEHKAEMLISVKQGDDKINKWLASGN---KPIN 116 Query: 332 TGKVSSADGFGTRAHLKNDYMQRMSAAVLGIYGNAKEEAIYPAYFVDSDKRKLDGA-NRY 390 VSS G D+++R AA G+YGN EA+YP D+ LDG+ ++Y Sbjct: 117 RWNVSSL--LGDEVFFNGDWLRRAGAAKAGLYGNDAVEAMYPFTRTDATGEPLDGSKHKY 174 Query: 391 TMRFAPGQLPPANAFWSLTMYQLPASLLYANPLNRYLINSSMLPNLKRDADGGITLYVQN 450 T+ F PGQLPP NAFWS+TMY + L NP+NRYLINS MLP +K + DG +TLY+Q Sbjct: 175 TLTFPPGQLPPVNAFWSVTMYDGKSQFLVKNPINRYLINSPMLPGMKTEPDGSVTLYIQE 234 Query: 451 ESPGQDKEANWLPAPKGPFFAVMRLYWPK-------PAARSGQWKAPPMQQSS 496 ++PG KEANWLPAP GP + VMRLYWPK PA + G W+ P +++ S Sbjct: 235 DNPGAGKEANWLPAPDGPIYLVMRLYWPKTTPPSILPAGK-GTWQPPGVKRVS 286 >MA2325 [S] COG5361 Uncharacterized conserved protein Mac Methanosarcina acetivorans str.C2A Length = 719 Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 142/451 (31%), Positives = 214/451 (47%), Gaps = 38/451 (8%) Query: 61 ARAIAKDAYIYGFPLVDSYRVQYSYF---VDRGGAEYKAPWNTIFNNARVYTPDDKAIQT 117 A ++ A+IYGFP V + +Y + D Y AP N ++ + + Sbjct: 284 AYSLGLQAFIYGFPYVYNALTRYKWTNLPQDPKRVPY-APVNHFWHATELIDATYRDGGC 342 Query: 118 PNSDTPYSYVGADLRAEPIVFTVPAVEKGRYYSLQFIDMYTFDFAYVGSRATGNGAGSYL 177 PN+DT YS DL EP++ +VP + RY++ + + +FAYVG R G+ AG+Y Sbjct: 343 PNNDTLYSIAWVDLSKEPVILSVPEIPADRYWTFELSTFTSDNFAYVGKR-VGSKAGNYA 401 Query: 178 LAGPTWKGQKPKGIRKVI-RCETEFAFVLYRTQLFNPGDVENVKKIQAGYKVQTLSQFLG 236 L GP W G P + V T + +L RT D+ +V +QA Y++ LS + G Sbjct: 402 LIGPDWLGDLPGDVTAVTPSSPTPWILILGRTLADGVDDLPSVHALQAQYRLTPLSLW-G 460 Query: 237 KPAPAAAPEVAFIKPITA-EQERNALEFFGILNFLLQFCPTHPSEKALMARFARIGVGVG 295 KP KP A ++ L + LN +L P + L+ +FA IG+G G Sbjct: 461 KPEVKLPENRDVYKPAVALAGSKDPLGPWKTLNAMLAENPPAAHHEVLLKQFATIGIGPG 520 Query: 296 KPFDANSLPPETRKALQ------------DGMADAWKAFAE-FKETQLDTGKVSSADGFG 342 D P ++ALQ M+ W F ++ + G+ D F Sbjct: 521 --LDIEQQPEVVKRALQRVLGVGIPLLRQQFMSGVWAKFVNGWRYPPSNEGRF--GDEFL 576 Query: 343 TRAHLKNDYMQRMSAAVLGIYGNAKEEAIYPAYFVDSDKRKLDGANRYTMRFAPGQL-PP 401 RA ++ GI N EA+Y D+ L A+RY + F PG PP Sbjct: 577 LRA---------ADQSLAGIVANDPIEAVYLVNLTDNSGEPLTSAHRYELTF-PGNFEPP 626 Query: 402 ANAFWSLTMYQLPASLLYANPLNRYLINSSMLPNLKRDADGGITLYVQNESPGQDKEANW 461 +AFWS+T+Y +L+ N +NRY I + P +K++ DGG T Y+Q+ESP DKE+NW Sbjct: 627 VDAFWSVTIYGTDNNLI-PNQINRYSIGNRS-PGVKKNEDGGTTFYLQSESPDPDKESNW 684 Query: 462 LPAPKGPFFAVMRLYWPKPAARSGQWKAPPM 492 LP G +F ++R+Y P P + +WK P + Sbjct: 685 LPTGNGAWFTILRMYIPHPEVVNAEWKCPSI 715 >SMc01184 [S] COG5361 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 512 Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 141/454 (31%), Positives = 205/454 (45%), Gaps = 31/454 (6%) Query: 56 VSADDARAIAKDAYIYGFPLVD--SYRVQYSYFVDRG---GAEYKAPWNTIFNNARVYTP 110 +S D AR +A+ AY++G+P+V+ + R + + G G AP I P Sbjct: 71 MSPDYARTVAQMAYVWGWPMVNMINRRAAITQAPEPGHLNGVLPAAPRGQIAMLNDYIEP 130 Query: 111 DDKAIQTPNSDTPYSYVGADLRAEPIVFTVPAVEKGRYYSLQFIDMYTFDFAYVGSRATG 170 + + PN D Y L EP+V VP R++ D T F ++G + G Sbjct: 131 SETFVTCPNQDVVYGLGFFALDEEPVVIQVPDFGD-RFWVYALYDARTDQFGHLG-KPYG 188 Query: 171 NGAGSYLLAGPTWKGQKPKGIRKVIRCETEFAFVLYRT-QLFNPGDVENVKKIQAGYKVQ 229 + G YLLAGP W G KP G V+RC T A + R Q P D + ++++ Sbjct: 189 SKPGFYLLAGPRWSGLKPDGTTDVLRCPTSLANAIPRVFQDDTPEDRKAIQEVINQVVAY 248 Query: 230 TLSQFLGKPAPAAAPEVAFI-KPITAEQERNAL---EFFGILNFLLQFCPTHPSEKALMA 285 L F G+ +V I P ++ +E + +FF +L P E+AL Sbjct: 249 PLKDFDGEMKTIEWAKVPDIPGPASSGEETKWVVPDKFFDQFGEVLDTVDPLPGEEALYG 308 Query: 286 RFARIGVGVGKPFDANSLPPETRKALQDGMADA----WKAFAEFKETQLDTGKVSSADGF 341 +F + DA S PE +K L + + F ++K G + + Sbjct: 309 QFRLL-------LDAASKDPELKKVLVATAVETEDKVIQPFFQWKHNGRPAG--NGWNRS 359 Query: 342 GTRAHLKNDYMQRMSAAVLGIYGNAKEEAIYPAYFVDSDKR--KLDGANRYTMRFAPGQL 399 A DY R A ++ N E Y ++ D D +L G+ Y + F GQ Sbjct: 360 TNNAQFGVDYFNRTGTAKSNMFDNRPNETQY--FYTDHDGAGGELSGSGSYAITFPAGQE 417 Query: 400 PPANAFWSLTMYQLPASLLYANPLNRYLINSSMLPNLKRDADGGITLYVQNESPGQDKEA 459 PP N FWSLT+Y L +AN L RY + + NLKR++DG +TLY +SPG DKE Sbjct: 418 PPVNGFWSLTLYN-DKHLFHANDLKRYSLGTKN-KNLKRNSDGSLTLYAGAKSPGGDKEN 475 Query: 460 NWLPAPKGPFFAVMRLYWPKPAARSGQWKAPPMQ 493 NWLPAP G F +R YW K A G W+ P ++ Sbjct: 476 NWLPAPDGKFSLYIRAYWGKEAILDGSWQPPAIE 509 >SMa0609 [S] COG5361 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 191 Score = 146 bits (369), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 77/163 (47%), Positives = 108/163 (66%), Gaps = 12/163 (7%) Query: 31 RQTLLGAAALLTSGLLASSRAWAQSVSADD---------ARAIAKDAYIYGFPLVDSYRV 81 ++ LL +AA+ G L ++ A + +V A D A+ IA++ +IYG PLV +Y V Sbjct: 4 KRDLLRSAAI---GALVAATANSTTVIAQDKAEWPSPLEAKDIAEEGFIYGLPLVMNYAV 60 Query: 82 QYSYFVDRGGAEYKAPWNTIFNNARVYTPDDKAIQTPNSDTPYSYVGADLRAEPIVFTVP 141 + V+R ++KAP+N I N ++ +P+D AI TPNSDTPYS + DLR EP+V +VP Sbjct: 61 MQEFAVNRDSGQFKAPFNEINNMHQLASPEDTAIITPNSDTPYSILWLDLRVEPVVVSVP 120 Query: 142 AVEKGRYYSLQFIDMYTFDFAYVGSRATGNGAGSYLLAGPTWK 184 AV+K RYYS+Q ID T++F Y+GSRATG GSYL+ GP WK Sbjct: 121 AVDKERYYSVQLIDGNTYNFGYIGSRATGTEPGSYLVVGPDWK 163