BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0061.p (506 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc01184 [S] COG5361 Uncharacterized conserved protein Sme Sinor... 472 e-133 MA2325 [S] COG5361 Uncharacterized conserved protein Mac Methano... 172 2e-42 SMa1060 [S] COG5361 Uncharacterized conserved protein Sme Sinorh... 153 1e-36 CC2518 Non COG 133 8e-31 SMa0610 [S] COG5361 Uncharacterized conserved protein Sme Sinorh... 119 2e-26 >SMc01184 [S] COG5361 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 512 Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust. Identities = 222/446 (49%), Positives = 296/446 (66%), Gaps = 2/446 (0%) Query: 59 PDARVKITEAYAAHVARDAFFWAWPLVNMFNRRLAFSKMTEQRYV-GPLLEAPLNRLTML 117 P + ++ YA VA+ A+ W WP+VNM NRR A ++ E ++ G L AP ++ ML Sbjct: 65 PATGIVMSPDYARTVAQMAYVWGWPMVNMINRRAAITQAPEPGHLNGVLPAAPRGQIAML 124 Query: 118 TDYVDPEERNVACPNQDVVYGLGMIALDVSPVVVQVPDFGDRFWVYQIVDLRTDSFVQLG 177 DY++P E V CPNQDVVYGLG ALD PVV+QVPDFGDRFWVY + D RTD F LG Sbjct: 125 NDYIEPSETFVTCPNQDVVYGLGFFALDEEPVVIQVPDFGDRFWVYALYDARTDQFGHLG 184 Query: 178 KMYGTLPGFYLLVGPNWNSEVPKGISRVFRASSNTGLIAPRVFQDDTPQDKRAIQAALTG 237 K YG+ PGFYLL GP W+ P G + V R ++ PRVFQDDTP+D++AIQ + Sbjct: 185 KPYGSKPGFYLLAGPRWSGLKPDGTTDVLRCPTSLANAIPRVFQDDTPEDRKAIQEVINQ 244 Query: 238 IAMYPLAEYDGRTKSMEWSKLPKVPGAPHGEEETRWVFPEKFFDELPAVLADAPPLPGEE 297 + YPL ++DG K++EW+K+P +PG EET+WV P+KFFD+ VL PLPGEE Sbjct: 245 VVAYPLKDFDGEMKTIEWAKVPDIPGPASSGEETKWVVPDKFFDQFGEVLDTVDPLPGEE 304 Query: 298 ARYAQVLAVLAAAKDNSKLKQAMIEAAKDAEEKLVNPLFQLRNYGQQLPHNWSTISNESA 357 A Y Q +L AA + +LK+ ++ A + E+K++ P FQ ++ G+ + W+ +N + Sbjct: 305 ALYGQFRLLLDAASKDPELKKVLVATAVETEDKVIQPFFQWKHNGRPAGNGWNRSTNNAQ 364 Query: 358 FGTDYFTRTAVAKSNILVNSPNETKYYYQDLDASGGRLNSANRYTVTFAKDGTPPVNGFW 417 FG DYF RT AKSN+ N PNET+Y+Y D D +GG L+ + Y +TF PPVNGFW Sbjct: 365 FGVDYFNRTGTAKSNMFDNRPNETQYFYTDHDGAGGELSGSGSYAITFPAGQEPPVNGFW 424 Query: 418 SLSIYNEHHFFVANPINRFSVGTKNKDLGPGPDGSLTIYVQADAPTDPTQRANWLPAPNG 477 SL++YN+ H F AN + R+S+GTKNK+L DGSLT+Y A +P + NWLPAP+G Sbjct: 425 SLTLYNDKHLFHANDLKRYSLGTKNKNLKRNSDGSLTLYAGAKSPGGDKEN-NWLPAPDG 483 Query: 478 DFSLYIRAYWPKAPVLDGSWTPPAVQ 503 FSLYIRAYW K +LDGSW PPA++ Sbjct: 484 KFSLYIRAYWGKEAILDGSWQPPAIE 509 >MA2325 [S] COG5361 Uncharacterized conserved protein Mac Methanosarcina acetivorans str.C2A Length = 719 Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 125/447 (27%), Positives = 211/447 (47%), Gaps = 17/447 (3%) Query: 67 EAYAAHVARDAFFWAWPLVNMFNRRLAFSKMTEQRYVGPLLEAPLNRLTMLTDYVDPEER 126 E YA + AF + +P V R ++ + + P AP+N T+ +D R Sbjct: 281 EEYAYSLGLQAFIYGFPYVYNALTRYKWTNLPQDPKRVPY--APVNHFWHATELIDATYR 338 Query: 127 NVACPNQDVVYGLGMIALDVSPVVVQVPDF-GDRFWVYQIVDLRTDSFVQLGKMYGTLPG 185 + CPN D +Y + + L PV++ VP+ DR+W +++ +D+F +GK G+ G Sbjct: 339 DGGCPNNDTLYSIAWVDLSKEPVILSVPEIPADRYWTFELSTFTSDNFAYVGKRVGSKAG 398 Query: 186 FYLLVGPNWNSEVPKGISRVFRASSNTG-LIAPRVFQDDTPQDKRAIQAALTGIAMYPLA 244 Y L+GP+W ++P ++ V +S LI R D D ++ A + PL+ Sbjct: 399 NYALIGPDWLGDLPGDVTAVTPSSPTPWILILGRTLADGV-DDLPSVHALQAQYRLTPLS 457 Query: 245 EYDG-RTKSMEWSKLPKVPGAPHGEEETRWVFPEKFFDELPAVLADAPPLPGEEARYAQV 303 + K E + K A G ++ P + L A+LA+ PP E Q Sbjct: 458 LWGKPEVKLPENRDVYKPAVALAGSKD-----PLGPWKTLNAMLAENPPAAHHEVLLKQF 512 Query: 304 LAVLAAAKDNSKLKQAMIEAAKDAEEKLVNPLFQ---LRNYGQQLPHNWSTI-SNESAFG 359 + + + + +++ A + PL + + + + W SNE FG Sbjct: 513 ATIGIGPGLDIEQQPEVVKRALQRVLGVGIPLLRQQFMSGVWAKFVNGWRYPPSNEGRFG 572 Query: 360 TDYFTRTA-VAKSNILVNSPNETKYYYQDLDASGGRLNSANRYTVTFAKDGTPPVNGFWS 418 ++ R A + + I+ N P E Y D SG L SA+RY +TF + PPV+ FWS Sbjct: 573 DEFLLRAADQSLAGIVANDPIEAVYLVNLTDNSGEPLTSAHRYELTFPGNFEPPVDAFWS 632 Query: 419 LSIYNEHHFFVANPINRFSVGTKNKDLGPGPDGSLTIYVQADAPTDPTQRANWLPAPNGD 478 ++IY + + N INR+S+G ++ + DG T Y+Q+++P DP + +NWLP NG Sbjct: 633 VTIYGTDNNLIPNQINRYSIGNRSPGVKKNEDGGTTFYLQSESP-DPDKESNWLPTGNGA 691 Query: 479 FSLYIRAYWPKAPVLDGSWTPPAVQRV 505 + +R Y P V++ W P++ +V Sbjct: 692 WFTILRMYIPHPEVVNAEWKCPSIVKV 718 >SMa1060 [S] COG5361 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 465 Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 126/454 (27%), Positives = 206/454 (45%), Gaps = 48/454 (10%) Query: 73 VARDAFFWAWPLVNMFNRRLAFSKMTEQRYV----GPLLEAPLNRLTMLTDYVDPEERNV 128 VAR+A+ + +P+V + +T +Y G + PLN L + PE+ + Sbjct: 40 VAREAYIYTYPMVKNY--------LTMYQYALDPGGSQYKGPLNTLVSIARVYTPEDTAI 91 Query: 129 ACPNQDVVYGLGMIALDVSPVVVQVPDF-GDRFWVYQIVDLRTDSFVQLG-KMYGTLPGF 186 PN D Y + L PVVV +P DR++ Q++DL T++ G ++ G G Sbjct: 92 ITPNSDTPYSFIVFDLRAEPVVVTMPPIEKDRYYSLQLIDLYTNNVDYPGTRVDGNGGGD 151 Query: 187 YLLVGPNWNSEVPKGISRVFRASSNT--GLIAPRVFQDDTPQDKRAIQAALTG--IAMYP 242 +L+ GP W +VPKGI RV + G+I ++F D + + IQA ++ Y Sbjct: 152 FLITGPGWKGDVPKGIKRVIEMPTTLALGIIRTQLFSPDDLEKVKQIQARYKAAVLSAYA 211 Query: 243 LAEYDGRTKSMEWSKLPKVPGAPHGEEETRWVFPEKFFDELPAVLADAPPLPGEEARYAQ 302 A S++W + + + ++ +L APP G+EA+ + Sbjct: 212 GAPAPAAPPSIDWLLI------------SDELMVTDYWSIAAFLLQFAPPYSGDEAQ-RE 258 Query: 303 VLAVLAA-------AKDNSKLKQAMIEAAKDAEEKLVNPLFQLRNYGQQLPHNWSTISNE 355 LA L D S A+++ A EK ++R+ +L + Sbjct: 259 NLAKLGIRDRGVWPGTDLSPETVALMKEVAVATEK------EIRDEAARLTDSSKIFGTP 312 Query: 356 SAFGTDYFTRTAVAKSNILVNSPNETKYYYQDLDASGGRLN-SANRYTVTFAKDGTPPVN 414 + R A A+ I NS E Y DA L+ RY +TF PPV+ Sbjct: 313 EFMKGRFMVRAAAAQGGIYGNSVQEALYVIYAFDAQKAPLDGKTGRYKLTFTPRTLPPVD 372 Query: 415 GFWSLSIYN-EHHFFVANPINRFSVGTKN-KDLGPGPDGSLTIYVQADAPTDPTQRANWL 472 FWSL++Y+ ++ F V NPI+R+ + + L G + +Y+Q ++P + +NWL Sbjct: 373 AFWSLTMYDRQNQFLVDNPIDRYLINSPMLAGLKKSNKGEIVLYLQRESPGAELE-SNWL 431 Query: 473 PAPNGDFSLYIRAYWPKAPVLDGSWTPPAVQRVS 506 PAP+ F + +R Y P+A LDG W PP ++ +S Sbjct: 432 PAPSEIFYVVMRLYLPRAEALDGRWAPPPIEALS 465 >CC2518 Non COG Length = 445 Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 129/443 (29%), Positives = 188/443 (42%), Gaps = 52/443 (11%) Query: 71 AHVARDAFFWAWPLVNMFNRRLAFSKMTEQRYVGPLLEAPLNRLTMLTDYVDPEERNVAC 130 A ARDA+ +A PL+ M R K A +N L D + R V Sbjct: 47 AKAARDAYLYALPLIEMATTRARLLKNPG---------AAINALAHTRTLSDHKARWVTT 97 Query: 131 PNQDVVYGLGMIALDVSPVVVQVPDFGDRFWVYQIVDLRTDSFVQLG-KMYGTLPGFYLL 189 PN D +Y + L PV + +P G R++ ++D+ T++ V L + G G + L Sbjct: 98 PNNDTLYSSAFLDLTKGPVTLTIPSLGQRYYSVAVMDMFTNNNVVLSTRTVGGEGGTFTL 157 Query: 190 VGPNWNSEVPKGISRVFRASSNTGLIAPRVFQDDTPQDKRAIQAALTGIAMYPLAEYDGR 249 VGP S P R ++ + R D +D A A G ++ Sbjct: 158 VGPGQASSGPNPT----RIATPHAWLLIRTLTDGG-EDLVAAHKAQDGFSL--------- 203 Query: 250 TKSMEWSKLPKVPGAPHGEEETRWVFPEKFFDELPAVLADAPPLPGEEARYAQVLAVLAA 309 K P AP R P +F A+LA P P + + A L A Sbjct: 204 -------KGPAG--APVAAYAARDAKPVDYFATARALLASNPAPPTDLRILKRTAAFLGA 254 Query: 310 AKDNSKLKQAMIEAAKDAEEKLVNPLFQLRNYGQQLPHNWST-ISNESAFGTDYFTRTAV 368 + ++ A+ ++ L Q R Q + WS+ +N +G DY R V Sbjct: 255 GPFDEAAAATGVQQAR-----MITLLAQGR---QTFINGWSSPRANLGDYGQDYVYRAIV 306 Query: 369 AKSNILVNSPNETKYYYQDLDASGGRLNSANRYTVTFAKDGTPPVNGFWSLSIY----NE 424 A + E Y D G Y +T P++GFWSLS+Y + Sbjct: 307 ALQGLGALPVAEAMYMKAAGDDGSGTFAGEGLYRLTLPAQ--LPLDGFWSLSMYEATADG 364 Query: 425 HHFFVANPINRFSVGTKNKDLGPGPDGSLTIYV-QADAPTDPTQRANWLPAPN-GDFSLY 482 FF NPI+R+++G + K L DGSL I++ ++D D T ANWLPAP G F+LY Sbjct: 365 QFFFTDNPIHRYTIGDRTKGLQRNADGSLDIWIGRSDPGGDKT--ANWLPAPAAGPFALY 422 Query: 483 IRAYWPKAPVLDGSWTPPAVQRV 505 +RAY PKA +LDG + PA+ +V Sbjct: 423 LRAYLPKAEMLDGRFRFPAIVKV 445 >SMa0610 [S] COG5361 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 286 Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 96/169 (56%), Gaps = 16/169 (9%) Query: 350 STISNESAFGTDYFTRTAVAKSNILVNSPNETKYYYQDLDASGGRLN-SANRYTVTFAKD 408 S + +E F D+ R AK+ + N E Y + DA+G L+ S ++YT+TF Sbjct: 122 SLLGDEVFFNGDWLRRAGAAKAGLYGNDAVEAMYPFTRTDATGEPLDGSKHKYTLTFPPG 181 Query: 409 GTPPVNGFWSLSIYN-EHHFFVANPINRFSVGTKNKDLGPG----PDGSLTIYVQADAPT 463 PPVN FWS+++Y+ + F V NPINR+ + N + PG PDGS+T+Y+Q D P Sbjct: 182 QLPPVNAFWSVTMYDGKSQFLVKNPINRYLI---NSPMLPGMKTEPDGSVTLYIQEDNP- 237 Query: 464 DPTQRANWLPAPNGDFSLYIRAYWPKA------PVLDGSWTPPAVQRVS 506 + ANWLPAP+G L +R YWPK P G+W PP V+RVS Sbjct: 238 GAGKEANWLPAPDGPIYLVMRLYWPKTTPPSILPAGKGTWQPPGVKRVS 286