BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0019.p         (61 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1436 [V] COG0841 Cation/multidrug efflux pump Pae Pseudomonas ...    58   7e-09
RSp1198 [V] COG0841 Cation/multidrug efflux pump Rso Ralstonia s...    57   7e-09

>PA1436 [V] COG0841 Cation/multidrug efflux pump Pae Pseudomonas aeruginosa
          Length = 1036

 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)

Query: 5   NGQTIPLDAVARLV-PTVGPLQINHQGQQPAVTISFNLAPGYSLGYAVDKI 54
           +G+ +PL A+A++  P  GPLQINH G  PAV +SFNLA G SLG AV  +
Sbjct: 777 SGEMVPLSAIAKVAAPRSGPLQINHNGMFPAVNLSFNLAAGVSLGEAVQAV 827


>RSp1198 [V] COG0841 Cation/multidrug efflux pump Rso Ralstonia solanacearum
          Length = 1041

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 35/52 (67%)

Query: 3   TANGQTIPLDAVARLVPTVGPLQINHQGQQPAVTISFNLAPGYSLGYAVDKI 54
           +  GQ +PL A A +V   G L +NHQGQ P+ TISFNLA G SLG AVD I
Sbjct: 775 STGGQQVPLGAFATVVEQPGSLVVNHQGQFPSATISFNLARGASLGAAVDAI 826