BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0022.p         (170 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr4647 [C] COG3038 Cytochrome B561 Mlo Mesorhizobium loti            117   1e-26
VCA0249 [C] COG3038 Cytochrome B561 Vch Vibrio cholerae                98   8e-21
RSc2719 [C] COG3038 Cytochrome B561 Rso Ralstonia solanacearum         97   2e-20
PA0918 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa          95   6e-20
STM1639 [C] COG3038 Cytochrome B561 Sty Salmonella typhimurium LT2     87   1e-17

>mlr4647 [C] COG3038 Cytochrome B561 Mlo Mesorhizobium loti
          Length = 179

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 6/168 (3%)

Query: 2   ALHWAVVVLVLGAWLIGQFGDELPRGAP-RETGLFVHMSLGLAVIAFAITRLFWRLRDPP 60
           A+HWAV +LV+G + +    +  PRG P R    ++H+S GL + A  + R+  RL    
Sbjct: 11  AIHWAVFLLVVGLYGLTYVEELFPRGDPGRALVWWLHISFGLLLFALVVIRVGMRLALGA 70

Query: 61  P--PPEQSPLGSWGKRASKAVHYLIYVALIAVPIAGIVLQFARGHALPIFGLFEIASPWP 118
           P    E SPL  W   A+KA H ++Y  L+A+P+ GI+L + RG +L  FGLF I +   
Sbjct: 71  PGLAQEMSPLERW---AAKAAHLVLYALLVAIPVLGILLTWYRGDSLSFFGLFTIPAQVS 127

Query: 119 ADRAFAHDVKEVHEVLANGMLALIGLHAAAALVHHFIFRDRTLLRMLP 166
            DR  A  ++E+H + AN +L L G+HAAAAL HHFI +D  L RMLP
Sbjct: 128 PDRDTARFIRELHSLCANSILILAGVHAAAALWHHFIRKDDVLKRMLP 175


>VCA0249 [C] COG3038 Cytochrome B561 Vch Vibrio cholerae
          Length = 177

 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 10/169 (5%)

Query: 1   MALHWAVVVLVLGAWLIGQFGDELPRGAPRETGLFVHMSLGLAVIAFAITRLFWRLRDPP 60
           +ALHW V +  +G ++IG +  +LPRG  +   + +H S G+ ++  A+ R+FWR+++  
Sbjct: 12  IALHWIVGLAFIGVFIIGAYLSDLPRGPEKMELVALHKSFGVLILLIALARVFWRIKEGA 71

Query: 61  PPPEQSPLGSWGKRASKAVHYLIYVALIAVPIAGIVLQFARGHALPIFGLFEIASP---- 116
            PP  S + +W ++ +KAVH L+ +A +A+P++GI +    G AL +FG   +A+     
Sbjct: 72  IPP-ASVMPAWQEKVAKAVHGLLLLATLAMPLSGIAMNIGGGRALEVFGYTLVAAGEKVV 130

Query: 117 WPADRAFAHDVKEVHEVLANGMLALIGLHAAAALVHHFIFRDRTLLRML 165
           W  +   A     VH+     ++A++ LH AA L HH I +D T+ RML
Sbjct: 131 WLQELGAA-----VHKTAPPIIIAIVLLHIAAVLKHHLIDKDATMARML 174


>RSc2719 [C] COG3038 Cytochrome B561 Rso Ralstonia solanacearum
          Length = 195

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 2/170 (1%)

Query: 1   MALHWAVVVLVLGAWLIGQFGDELPRGAPRETGLF-VHMSLGLAVIAFAITRLFWRLRDP 59
           +ALHW + +L+  A+ +G +  ++P   P +  L+  H   G+ V+  A+ R+ WRL  P
Sbjct: 27  IALHWIIALLIFAAFGLGLYMTDIPGFTPTKLKLYSYHKWAGITVLILAVLRVLWRLTHP 86

Query: 60  PPPPEQSPLGSWGKRASKAVHYLIYVALIAVPIAGIVLQFARGHALPIFGLFEIASPWPA 119
            P P    + +W ++A++  H ++Y+ ++AVP+ G +L  A G  +   GL+E+  P+  
Sbjct: 87  APAPVAG-MPAWQQKAAEGAHIVLYLLILAVPLTGYLLSVAAGIKVVYLGLWELPMPFDK 145

Query: 120 DRAFAHDVKEVHEVLANGMLALIGLHAAAALVHHFIFRDRTLLRMLPVTR 169
             A     +  HE L   M  ++ LH  AAL HH +  D TL RMLP  R
Sbjct: 146 SDALKEIFQVAHEWLNWTMATIVVLHILAALKHHIVDSDGTLRRMLPFLR 195


>PA0918 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa
          Length = 182

 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 93/170 (54%), Gaps = 3/170 (1%)

Query: 1   MALHWAVVVLVLGAWLIGQFGDELPRGAP-RETGLFVHMSLGLAVIAFAITRLFWRLRDP 59
           +ALHW  ++L+ G +   +     P+G+  RE     H  LGL+V      RL  RL  P
Sbjct: 15  IALHWLTLLLIAGVYACIELKGNFPKGSETRELLKQWHFMLGLSVFLLVWLRLLVRLATP 74

Query: 60  PPPPEQSPLGSWGKRASKAVHYLIYVALIAVPIAGIVLQFARGHALPIFGLFEIASPWPA 119
            P  E + + +W    ++ +HY +Y+ +I +P AG ++  A G  +P FGL E+      
Sbjct: 75  TPRIEPA-IPAWQATLARLMHYALYLMMIGLPFAGWLILSAAGKPIPFFGL-ELPPLVDK 132

Query: 120 DRAFAHDVKEVHEVLANGMLALIGLHAAAALVHHFIFRDRTLLRMLPVTR 169
           +   A  +KE HE + N    LIGLHAAAAL HHF+ RD TL+RMLP  R
Sbjct: 133 NPDLAGQIKEWHETIGNAGYFLIGLHAAAALFHHFVSRDNTLVRMLPQRR 182


>STM1639 [C] COG3038 Cytochrome B561 Sty Salmonella typhimurium LT2
          Length = 176

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 11/174 (6%)

Query: 1   MALHWAVVVLVLGAWLIGQFGDELPRGAPRETGLFVHMSLGLAVIAFAITRLFWRLRDPP 60
           + +HW V  LV+ A+   +     PR   R      H+S G+ ++   + RLF RL+ P 
Sbjct: 10  IGIHWLVFFLVIVAYAAMELRGFAPRSY-RPWFNMTHVSCGITILLLMVARLFIRLKYPT 68

Query: 61  PP--PEQSPLGSWGKRASKAVHYLIYVALIAVPIAGIVLQFARGHALPIFGLFEIASPWP 118
           PP  P   P+ +     +   H +IY+  IA+P+ G+V+ + RG+    FG   I  P  
Sbjct: 69  PPIVPRPKPMMT---GMAHLGHLVIYLLFIALPVIGLVMMYNRGNPWVAFG---ITMPHA 122

Query: 119 ADRAFAH--DVKEVHEVLANGMLALIGLHAAAALVHHFIFRDRTLLRMLPVTRS 170
           A+  F     +K  H  LAN    +IGLHA AAL+HH+ ++D TLLRM+P  R 
Sbjct: 123 AEANFERVDMLKSWHVTLANLGYFVIGLHAIAALMHHYFWKDNTLLRMMPRKRD 176