BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0017.p         (189 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2719 [C] COG3038 Cytochrome B561 Rso Ralstonia solanacearum         99   6e-21
mlr4647 [C] COG3038 Cytochrome B561 Mlo Mesorhizobium loti             92   6e-19
PA0918 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa          85   8e-17
PA0422 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa          83   4e-16
yceJ [C] COG3038 Cytochrome B561 Eco Escherichia coli K12              75   1e-13

>RSc2719 [C] COG3038 Cytochrome B561 Rso Ralstonia solanacearum
          Length = 195

 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 6/179 (3%)

Query: 9   YGPVAKTLHWITVLLVIIAWTLGMFGEELSEGAAQESGLLT-HIWIGLAVLVVAVVRIPW 67
           YG  A  LHWI  LL+  A+ LG++  ++      +  L + H W G+ VL++AV+R+ W
Sbjct: 22  YGKPAIALHWIIALLIFAAFGLGLYMTDIPGFTPTKLKLYSYHKWAGITVLILAVLRVLW 81

Query: 68  RIANPPPKIVPTEFGRWLVEWTDPASRLMHYVLYGLLVLVPAFGIALQFAEGHSLPLFGI 127
           R+ +P P  V       +  W   A+   H VLY L++ VP  G  L  A G  +   G+
Sbjct: 82  RLTHPAPAPVAG-----MPAWQQKAAEGAHIVLYLLILAVPLTGYLLSVAAGIKVVYLGL 136

Query: 128 GEIPSPWLADKAFAHNLKEVHEILANLLVILAVFHMAAALVHHIVFGDSTLKRMLPRMR 186
            E+P P+    A     +  HE L   +  + V H+ AAL HHIV  D TL+RMLP +R
Sbjct: 137 WELPMPFDKSDALKEIFQVAHEWLNWTMATIVVLHILAALKHHIVDSDGTLRRMLPFLR 195


>mlr4647 [C] COG3038 Cytochrome B561 Mlo Mesorhizobium loti
          Length = 179

 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 20/184 (10%)

Query: 9   YGPVAKTLHWITVLLVIIAWTLGMFG----EELSEGAAQESGLL--THIWIGLAVLVVAV 62
           Y    K +HW   LLV+     G++G    EEL         L+   HI  GL +  + V
Sbjct: 5   YTSTQKAIHWAVFLLVV-----GLYGLTYVEELFPRGDPGRALVWWLHISFGLLLFALVV 59

Query: 63  VRIPWRIANPPPKIVP--TEFGRWLVEWTDPASRLMHYVLYGLLVLVPAFGIALQFAEGH 120
           +R+  R+A   P +    +   RW       A++  H VLY LLV +P  GI L +  G 
Sbjct: 60  IRVGMRLALGAPGLAQEMSPLERW-------AAKAAHLVLYALLVAIPVLGILLTWYRGD 112

Query: 121 SLPLFGIGEIPSPWLADKAFAHNLKEVHEILANLLVILAVFHMAAALVHHIVFGDSTLKR 180
           SL  FG+  IP+    D+  A  ++E+H + AN ++ILA  H AAAL HH +  D  LKR
Sbjct: 113 SLSFFGLFTIPAQVSPDRDTARFIRELHSLCANSILILAGVHAAAALWHHFIRKDDVLKR 172

Query: 181 MLPR 184
           MLP 
Sbjct: 173 MLPE 176


>PA0918 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa
          Length = 182

 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 7/182 (3%)

Query: 6   RDDYGPVAKTLHWITVLLVIIAWTLGMFGEELSEGAAQESGLLT-HIWIGLAVLVVAVVR 64
              YG +   LHW+T+LL+   +          +G+     L   H  +GL+V ++  +R
Sbjct: 7   ESRYGSLTIALHWLTLLLIAGVYACIELKGNFPKGSETRELLKQWHFMLGLSVFLLVWLR 66

Query: 65  IPWRIANPPPKIVPTEFGRWLVEWTDPASRLMHYVLYGLLVLVPAFGIALQFAEGHSLPL 124
           +  R+A P P+I P      +  W    +RLMHY LY +++ +P  G  +  A G  +P 
Sbjct: 67  LLVRLATPTPRIEPA-----IPAWQATLARLMHYALYLMMIGLPFAGWLILSAAGKPIPF 121

Query: 125 FGIGEIPSPWLADKAFAHNLKEVHEILANLLVILAVFHMAAALVHHIVFGDSTLKRMLPR 184
           FG+ E+P     +   A  +KE HE + N    L   H AAAL HH V  D+TL RMLP+
Sbjct: 122 FGL-ELPPLVDKNPDLAGQIKEWHETIGNAGYFLIGLHAAAALFHHFVSRDNTLVRMLPQ 180

Query: 185 MR 186
            R
Sbjct: 181 RR 182


>PA0422 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa
          Length = 189

 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 87/182 (47%), Gaps = 6/182 (3%)

Query: 9   YGPVAKTLHWITVLLVIIAWTLGMFGEELSEGAA-QESGLLTHIWIGLAVLVVAVVRIPW 67
           YG  +  LHW + L+V   + LG++  ELS            H  IG+ + +  +VRI W
Sbjct: 10  YGVFSLFLHWGSALVVFGLFGLGLWMRELSYYDPWYHPAPALHKSIGILLAIALLVRIVW 69

Query: 68  RIANPPPKIVPTEFGRWLVEWTDPASRLMHYVLYGLLVLVPAFGIALQFAEGHSLPLFGI 127
           R  +PPP   P   G      T  AS+L H  LYGLL+ V   G  +  A+G  + +FG 
Sbjct: 70  RFVSPPPP-APANHG----PLTRVASKLGHLALYGLLLAVIVAGYLISTADGEPISVFGW 124

Query: 128 GEIPSPWLADKAFAHNLKEVHEILANLLVILAVFHMAAALVHHIVFGDSTLKRMLPRMRK 187
             +P+        A    E+H  LA  LV+ AV H  AAL HH V  D TLKRML R   
Sbjct: 125 FSVPATLSGLPDQADVAGEIHLYLAWALVVFAVLHALAALKHHFVDRDPTLKRMLGRSSN 184

Query: 188 QM 189
             
Sbjct: 185 DQ 186


>yceJ [C] COG3038 Cytochrome B561 Eco Escherichia coli K12
          Length = 188

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%)

Query: 3   TIARDDYGPVAKTLHWITVLLVIIAWTLGMFGEELS--EGAAQESGLLTHIWIGLAVLVV 60
           T   + YG ++   HW++ ++V   + LG++   LS  +G   ++  L H  IG+ +++ 
Sbjct: 4   TNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPEL-HKSIGILLMMG 62

Query: 61  AVVRIPWRIANPPPKIVPTEFGRWLVEWTDPASRLMHYVLYGLLVLVPAFGIALQFAEGH 120
            V+R+ WR+ +PPP  +P+         T  A+R  H  LY LL  +   G  +  A+G 
Sbjct: 63  LVIRVLWRVISPPPGPLPS-----YSPMTRLAARAGHLALYLLLFAIGISGYLISTADGK 117

Query: 121 SLPLFGIGEIPSPWLADKAFAHNLKEVHEILANLLVILAVFHMAAALVHHIVFGDSTLKR 180
            + +FG  ++P+      A A     +H  LA  +V+L+V H   AL HH +  D TLKR
Sbjct: 118 PISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKR 177

Query: 181 MLPRMRKQ 188
           ML +    
Sbjct: 178 MLGKSSSD 185