BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0027.p         (128 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr6608 [T] COG0589 Universal stress protein UspA and related nu...    58   7e-09

>mlr6608 [T] COG0589 Universal stress protein UspA and related
           nucleotide-binding proteins Mlo Mesorhizobium loti
          Length = 269

 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 1   MSYASLLVYVNADHVSTNLVAVAAAVADKFSARLIGLSALAVLPPFVA--EGVVVVDNAT 58
           MSY S++V +  D     +V V   +A++F ARLIGL+A A +PP VA  +G+V      
Sbjct: 1   MSYKSIIVNLAIDAPPAPIVRVGVELAERFGARLIGLAA-ADVPPLVATGQGMVYEGEIM 59

Query: 59  EFDIAKMKAKLESAGNKFRSAAGSGREVEWRSAIEFPTKAVIDGARCADLIVIQKGKSDD 118
           +    +++ +L     +F     +    EW  A+  PT+ +   AR ADLIV  +   D+
Sbjct: 60  QIQRTEIEKRLAELRAEFERLVPASIFSEWGQAVCSPTRFLSVSARAADLIVTGQA-GDN 118

Query: 119 IYRSI 123
           ++R++
Sbjct: 119 VFRAV 123