BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0024.p (243 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll6611 [R] COG0517 FOG Mlo Mesorhizobium loti 195 6e-50 SMa0636 [R] COG0517 FOG Sme Sinorhizobium meliloti 127 3e-29 SMa1086 [R] COG0517 FOG Sme Sinorhizobium meliloti 122 9e-28 alr3813 [R] COG0517 FOG Nos Nostoc sp. PCC 7120 78 1e-14 PAE2866a [R] COG0517 FOG Pya Pyrobaculum aerophilum 75 1e-13 >mll6611 [R] COG0517 FOG Mlo Mesorhizobium loti Length = 232 Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 7/229 (3%) Query: 1 MRAHEIMARNVLTIAPEADLAEAGSLMLRHDISGLPVVDRQGALVGILSESDFLRRSEIG 60 M+A IM++ V+ I P A +AEA LML +SGLPV+ G LVGI+SE DFLRR E+G Sbjct: 1 MQAEAIMSKPVVGIDPSASIAEAAGLMLSKKVSGLPVIRNDGRLVGIVSEGDFLRRGELG 60 Query: 61 TQRRRPRWLEWVLGAGAAAESYVRERGRTVSEIMTASPITVNEQTTLAEIVDIMERNRIK 120 T+R+R RWLE+++ G AA+ YVR GR V E+M+ +T + +LA++V++M R +K Sbjct: 61 TERKRSRWLEFLVTPGRAADEYVRANGRRVEEVMSQDVVTASPAASLAKVVELMTRRHVK 120 Query: 121 RVPVVQEGKLTGLVSRSNLMQAAASLAGRMP---APTTDDEHIRMRIVDEIENKDWCPSG 177 R+P + GK+ G+++RS+L++A L G +P A DDE IR I E+ + W + Sbjct: 121 RIPATEGGKVVGIITRSDLLRA---LLGVLPDGAATVIDDEQIRHNIATELAKQKWAGND 177 Query: 178 L-NVIVKDGIVHLSGMIAEERCRKAAIVAAENVEGVVKVHDHLRWFDRI 225 L NV+V +V LSG I +ER R+AAIVAAENV GV V D L D + Sbjct: 178 LINVMVDKSVVTLSGAIFDERERQAAIVAAENVAGVKAVKDDLFCADPV 226 >SMa0636 [R] COG0517 FOG Sme Sinorhizobium meliloti Length = 217 Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%) Query: 7 MARNVLTIAPEADLAEAGSLMLRHDISGLPVVDRQGALVGILSESDFLRRSEIGTQRRRP 66 M V+ ++P+ + +A LM H +SG+PVVD G L+G++SE D +RR+E+ ++ Sbjct: 1 MTTKVVKLSPDDSVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRAELCSEAS-- 58 Query: 67 RWLEWVLGAGAA------AESYVRERGRTVSEIMTASPITVNEQTTLAEIVDIMERNRIK 120 VL A A A +++R V ++MTA+P+T+ E+ LA + +M+ IK Sbjct: 59 -----VLMADMAIDPDDRANAFIRRCSWRVGDVMTANPVTIEEEAPLARVAGLMQERGIK 113 Query: 121 RVPVVQEGKLTGLVSRSNLMQAAASLAGRMPAPTTDDEHIRMRIVDEI-ENKDWCPSGLN 179 R+PVV++G+L G+VSR++L+QA S A DE IR I+ + EN + Sbjct: 114 RIPVVRDGELVGIVSRADLLQAIFSTKPDETA--AGDEAIRRSILVRLGENTSLEELDVT 171 Query: 180 VIVKDGIVHLSGMIAEERCRKAAIVAAENVEGVVKVHDHL 219 V V +GIVH G + CR+AA + AE+V GV + +H Sbjct: 172 VTVTEGIVHFWGQVETAGCRRAARIMAESVHGVRGIVEHF 211 >SMa1086 [R] COG0517 FOG Sme Sinorhizobium meliloti Length = 224 Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 129/222 (58%), Gaps = 10/222 (4%) Query: 1 MRAHEIMARNVLTIAPEADLAEAGSLMLRHDISGLPVVDRQGALVGILSESDFLRRSEIG 60 M A +IM + VL+I+P+ ++ A ML + ISGLPV D +G LVG+LSE D LRR+E+G Sbjct: 1 MLARDIMKKRVLSISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRAELG 60 Query: 61 TQRRRPRWLEWVLGAGAAAESYVRERGRTVSEIMTASPITVNEQTTLAEIVDIMERNRIK 120 RR + G A E++++ V ++MT +TV+E + + ++M IK Sbjct: 61 LVSRRD-----IAGVRAKPEAFIKGHSWRVGDVMTQPVVTVDEDMPVGRVAELMAAKGIK 115 Query: 121 RVPVVQEGKLTGLVSRSNLMQA-AASLAGRMPAPTTDDEHIRMRIVDEIENKDWCPSG-L 178 R+PV++ ++ G++SRS++++A ASL + DE +R ++ + + G + Sbjct: 116 RIPVMRAEEMVGIISRSDILRAVTASLPDVI---ANGDEAVRRAVLARLCSDLGLEKGAI 172 Query: 179 NVIVKDGIVHLSGMIAEERCRKAAIVAAENVEGVVKVHDHLR 220 +V +++G V LSG + E R+AA VAAE + G V + LR Sbjct: 173 DVTIENGTVSLSGQVESEALREAARVAAETISGAGGVRNRLR 214 >alr3813 [R] COG0517 FOG Nos Nostoc sp. PCC 7120 Length = 152 Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 85/148 (57%), Gaps = 10/148 (6%) Query: 5 EIMARNVLTIAPEADLAEAGSLMLRHDISGLPVVDRQGALVGILSESDFLRRSEIGTQRR 64 ++M+ N + + PE L EA ++ ISGLPVVD G L+GI+SE+D + + T Sbjct: 7 DVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQE---TGVT 63 Query: 65 RPRWLEWVLGAGAAAESYVRER------GRTVSEIMTASPITVNEQTTLAEIVDIMERNR 118 P ++ ++ V ER G+TV E+M+ +P+TV+ + ++ + +M Sbjct: 64 PPAYIMFLDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSVKQAAQLMHDRN 123 Query: 119 IKRVPVVQE-GKLTGLVSRSNLMQAAAS 145 + R+PV+ + G++ G+++R ++++A A+ Sbjct: 124 VHRLPVLDDAGQVIGILTRGDIIRAMAT 151 >PAE2866a [R] COG0517 FOG Pya Pyrobaculum aerophilum Length = 147 Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 24/139 (17%) Query: 3 AHEIMARNVLTIAPEADLAEAGSLMLRHDISGLPVVDRQGALVGILSESDFLRRSEIGTQ 62 A++ R ++TI PE L EA LM++++I LPVV+ G L+G+LSESD +R G Sbjct: 30 AYDAAPRELITIGPEKTLKEAVDLMVKYNIGFLPVVE-GGKLLGVLSESDVMRLVAQGVD 88 Query: 63 RRRPRWLEWVLGAGAAAESYVRERGRTVSEIMTASPITVNEQTTLAEIVDIMERNRIKRV 122 P +S M PITV++Q+TL E ++M ++ I+ + Sbjct: 89 LNTP-----------------------ISVYMNTKPITVSKQSTLREAAELMVKHNIRHL 125 Query: 123 PVVQEGKLTGLVSRSNLMQ 141 PV+++GK+ ++S ++++ Sbjct: 126 PVIEDGKVVAVLSVKDIVK 144