BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0040.p         (116 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMa1548_3 [T] COG2200 FOG Sme Sinorhizobium meliloti                  143   8e-35
CC3094_4 [T] COG2200 FOG Ccr Caulobacter vibrioides                   142   2e-34
mll7787_3 [T] COG2200 FOG Mlo Mesorhizobium loti                      127   4e-30
AGl2664_2 [T] COG2200 FOG Atu Agrobacterium tumefaciens strain C...   125   2e-29
mll4364_3 [T] COG2200 FOG Mlo Mesorhizobium loti                      124   5e-29

>SMa1548_3 [T] COG2200 FOG Sme Sinorhizobium meliloti
          Length = 253

 Score =  143 bits (361), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 68/107 (63%), Positives = 86/107 (80%)

Query: 1   LRELGVSISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVKDLARRSDCLAIVRAISGLGRS 60
           LR LGV I+MDDFGTGYSSL YLRSFPFDKIK+D++FV+DL    + LAIV+A++GLG+S
Sbjct: 144 LRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQS 203

Query: 61  LKITTTAEGVETTDQLDWLRAEGCNEVQGFLFSAARPAGEIAALLSG 107
           L +TT+ EGVET DQL  + +EG NEVQG+LFS   PA EI+ L++ 
Sbjct: 204 LGMTTSVEGVETEDQLAVVDSEGFNEVQGYLFSRPLPAAEISKLIAA 250


>CC3094_4 [T] COG2200 FOG Ccr Caulobacter vibrioides
          Length = 283

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 82/105 (78%)

Query: 1   LRELGVSISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVKDLARRSDCLAIVRAISGLGRS 60
           L+ LGV ISMDDFGTGYSSLSYLRSFPFDKIKID++FV+D+   SD +AI++A+  LG S
Sbjct: 128 LKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGAS 187

Query: 61  LKITTTAEGVETTDQLDWLRAEGCNEVQGFLFSAARPAGEIAALL 105
           + + TTAEGVET  QLD LR +GC E+QG+  S   PA EIA +L
Sbjct: 188 MGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASEIAKML 232


>mll7787_3 [T] COG2200 FOG Mlo Mesorhizobium loti
          Length = 257

 Score =  127 bits (320), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 75/109 (68%), Gaps = 1/109 (0%)

Query: 1   LRELGVSISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVKDLARRSDCLAIVRAISGLGRS 60
           LR+LG+ I++DDFGTGYSSL+YLR FP DKIKIDRSF++D+  R D  AIVR I GLG  
Sbjct: 144 LRDLGIRIALDDFGTGYSSLAYLRRFPVDKIKIDRSFIRDMGNR-DTAAIVRTIIGLGNE 202

Query: 61  LKITTTAEGVETTDQLDWLRAEGCNEVQGFLFSAARPAGEIAALLSGFA 109
           L I  TAEGVET  QLD LR  GC E QG+L      A +I  LL   A
Sbjct: 203 LGIVVTAEGVETEVQLDMLRDNGCEEAQGYLIGVPSKAADIQRLLKARA 251


>AGl2664_2 [T] COG2200 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 262

 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 78/103 (75%)

Query: 1   LRELGVSISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVKDLARRSDCLAIVRAISGLGRS 60
           L+ +G+ I+MDDFGTGYSSL+ LR  PFDKIKIDRSF++D+    D LAIV  + G+GRS
Sbjct: 156 LKAVGIKIAMDDFGTGYSSLANLRGVPFDKIKIDRSFLRDITSDRDALAIVEFVVGVGRS 215

Query: 61  LKITTTAEGVETTDQLDWLRAEGCNEVQGFLFSAARPAGEIAA 103
           L++TT AEG+ET +Q + +R  GC++VQG+L S   PA E+ A
Sbjct: 216 LRMTTIAEGIETEEQYECVRRLGCDQVQGYLISRPLPAKELVA 258


>mll4364_3 [T] COG2200 FOG Mlo Mesorhizobium loti
          Length = 258

 Score =  124 bits (311), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 1/107 (0%)

Query: 1   LRELGVSISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVKDLARRSDCLAIVRAISGLGRS 60
           ++ LGV+I++DDFGTGYSSL  LRSFPFDKIK+DRSF+ D+ R     AI+RA+  LGRS
Sbjct: 134 IKALGVTIAIDDFGTGYSSLDTLRSFPFDKIKLDRSFMADVERSPQAKAIIRAVLTLGRS 193

Query: 61  LKITTTAEGVETTDQLDWLRAEGCNEVQGFLFSAARPAGEIAALLSG 107
           L I   AEGVET  QL  L+ EGCNE QG+     +P  +I  L+SG
Sbjct: 194 LDIPVLAEGVETHVQLTILQVEGCNEAQGYFLGRPKPIDQI-GLISG 239