BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0098.p (230 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGpA798 [E] COG0410 ABC-type branched-chain amino acid transport... 255 7e-68 all1947 [E] COG0410 ABC-type branched-chain amino acid transport... 225 7e-59 sll0374 [E] COG0410 ABC-type branched-chain amino acid transport... 217 2e-56 RSc2037 [E] COG0410 ABC-type branched-chain amino acid transport... 206 4e-53 mll0756 Non COG 202 4e-52 >AGpA798 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 231 Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 138/231 (59%), Positives = 168/231 (72%), Gaps = 1/231 (0%) Query: 1 MLELTDVDAFYGNSRALQGINLTVGNGEFLSVLGRNGVGKTTLMRSILGLMDRCTGRLSL 60 ML L +V ++YG S L G+ L V G+ S+LGRN GKTTL+++++ L D TG + L Sbjct: 1 MLTLKNVHSYYGRSHILHGVTLDVPTGKVTSILGRNSTGKTTLLKTLMALTDGMTGEMHL 60 Query: 61 DGADISPLRTYQRAKAGIAYVPQGRGILPKFTVRENLTLGTFA-AKSANGIEEWVLELFP 119 G DIS T+ RA+AGIAYVPQGR I+P F++REN+ +G FA A I V ELFP Sbjct: 61 QGQDISSSPTHMRARAGIAYVPQGREIIPDFSIRENILMGAFARADRKREIPALVPELFP 120 Query: 120 VLKDFLNRYGGNLSGGQQQQLAIARALLAKPKVILLDEPTEGIQPNIVEQIENVIVSLNR 179 L L+R GG LSGGQQQQLAIARAL A PKV+LLDEP EGIQP+IVE+IE +I+ LNR Sbjct: 121 YLMANLDRPGGVLSGGQQQQLAIARALAADPKVLLLDEPNEGIQPSIVEEIEKIIIRLNR 180 Query: 180 ERGITVVLVEQNVAFARRASHRFALLEKGRVVAKGTIGELTDDLIQLHMAV 230 E G+T+VLVEQNVAFAR ASH FA+LEKG VVA G I L+D L+ HMAV Sbjct: 181 EIGMTIVLVEQNVAFARHASHHFAMLEKGGVVAAGAIDALSDTLVHRHMAV 231 >all1947 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Nos Nostoc sp. PCC 7120 Length = 232 Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 116/234 (49%), Positives = 169/234 (72%), Gaps = 6/234 (2%) Query: 1 MLELTDVDAFYGNSRALQGINLTVGNGEFLSVLGRNGVGKTTLMRSILGLMDRCTGRLSL 60 ML +++++ +YG S L+ ++LTV NG+ + ++GRNGVGKTTL+++I+GL+ +G ++L Sbjct: 1 MLNISNLNVYYGESHILRNVDLTVPNGQMICLIGRNGVGKTTLLKTIMGLLKPRSGTINL 60 Query: 61 DGADISPLRTYQRAKAGIAYVPQGRGILPKFTVRENLTLGTFA----AKSANGIEEWVLE 116 G I+ QRAK GI YVPQGR I+P+ TV+ENL LG A K A I E + Sbjct: 61 AGNLINSKSPDQRAKMGIGYVPQGRDIIPRLTVKENLLLGLEARQKQVKKAE-IPEEIFS 119 Query: 117 LFPVLKDFLNRYGGNLSGGQQQQLAIARALLAKPKVILLDEPTEGIQPNIVEQIENVIVS 176 LFPVLK L+R GG+LSGGQQQQLAIARAL+ +P++++LDEPTEGIQP+I+ +IE + Sbjct: 120 LFPVLKTMLSRMGGDLSGGQQQQLAIARALMGQPQLLVLDEPTEGIQPSIILEIEAAVRR 179 Query: 177 LNRERGITVVLVEQNVAFARRASHRFALLEKGRVVAKGTIGELTDDLIQLHMAV 230 + GI+V+LVEQ++ F R+A + +A ++KG +VA G+ EL+ D+IQ +AV Sbjct: 180 IIETTGISVLLVEQHLHFVRQADYYYA-MQKGAIVASGSTDELSQDVIQRFLAV 232 >sll0374 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Syn Synechocystis Length = 249 Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 108/234 (46%), Positives = 168/234 (71%), Gaps = 5/234 (2%) Query: 1 MLELTDVDAFYGNSRALQGINLTVGNGEFLSVLGRNGVGKTTLMRSILGLMDRCTGRLSL 60 ML+++D++ +YG S L+ +++++ G+ + ++GRNGVGKTTL+++I+GL+ +G + Sbjct: 17 MLQISDLNVYYGESHILRNVDMSIAPGQMVCLIGRNGVGKTTLLKTIMGLLSPRSGYVVY 76 Query: 61 DGADISPLRTYQRAKAGIAYVPQGRGILPKFTVRENLTLGTFA----AKSANGIEEWVLE 116 ++ + T +RA+ GI YVPQGR I+P+ TV+ENL LG A ++ GI + + E Sbjct: 77 GDRQLNSVPTDKRARLGIGYVPQGREIIPRLTVQENLLLGLEACADKSQRQKGIPDEIFE 136 Query: 117 LFPVLKDFLNRYGGNLSGGQQQQLAIARALLAKPKVILLDEPTEGIQPNIVEQIENVIVS 176 LFPVLK L+R+GG+LSGGQQQQLAIARAL+ +PK++LLDEPTEGIQP+I+ +IE + Sbjct: 137 LFPVLKTMLSRWGGDLSGGQQQQLAIARALMGQPKLLLLDEPTEGIQPSIILEIEAAVKR 196 Query: 177 LNRERGITVVLVEQNVAFARRASHRFALLEKGRVVAKGTIGELTDDLIQLHMAV 230 + GI+V+LVEQ++ F R+A +A ++KG +VA G L+ ++IQ +AV Sbjct: 197 IIAATGISVLLVEQHLHFVRQADRYYA-MQKGGIVASGETQTLSQEVIQKFLAV 249 >RSc2037 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 230 Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 98/230 (42%), Positives = 157/230 (68%) Query: 1 MLELTDVDAFYGNSRALQGINLTVGNGEFLSVLGRNGVGKTTLMRSILGLMDRCTGRLSL 60 ML++ ++ +YG S L+ ++ V G+ ++LGRNGVGKTTL++ ++G++ +G + Sbjct: 1 MLQIQQLNQYYGGSHILRNVSFEVPAGKLTALLGRNGVGKTTLLKCLMGVLPATSGTIDW 60 Query: 61 DGADISPLRTYQRAKAGIAYVPQGRGILPKFTVRENLTLGTFAAKSANGIEEWVLELFPV 120 +G I L Y+R G+AYVPQGR I P+ TV ENL +G A ++ +G+ + + LFPV Sbjct: 61 EGRAIHKLPAYERVSRGLAYVPQGREIFPRLTVEENLLIGAAARRAPSGVPDSIYALFPV 120 Query: 121 LKDFLNRYGGNLSGGQQQQLAIARALLAKPKVILLDEPTEGIQPNIVEQIENVIVSLNRE 180 L R GG+LSGGQQQQLAI RAL+++P++++LDEPTEGIQP+++++I + L E Sbjct: 121 LAQMKGRRGGDLSGGQQQQLAIGRALMSEPRLLILDEPTEGIQPSVIQEIGRTLRRLVDE 180 Query: 181 RGITVVLVEQNVAFARRASHRFALLEKGRVVAKGTIGELTDDLIQLHMAV 230 G++V+LVEQ FARR + R+ ++ +G V+A+G ++ D ++ +AV Sbjct: 181 FGMSVLLVEQYYDFARRIADRYVVMRRGEVIAQGDGADMDADGVRELVAV 230 >mll0756 Non COG Length = 231 Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MLELTDVDAFYGNSRALQGINLTVGNGEFLSVLGRNGVGKTTLMRSILGLMDRCTGRLSL 60 MLE+++ YG ++AL+G++L G G+ VLGRNGVGKT+LMRSI+G +G ++ Sbjct: 1 MLEVSNATLHYGAAQALRGVSLKAGAGKITCVLGRNGVGKTSLMRSIVGHHRLTSGSVAF 60 Query: 61 DGADISPLRTYQRAKAGIAYVPQGRGILPKFTVRENLTLGTFAAKSAN-GIEEWVLELFP 119 +G + Y RA++GIA+VPQGR I P TVRENL G K A+ + V ELFP Sbjct: 61 EGKALDRSAAYDRARSGIAFVPQGREIFPLLTVRENLESGFAPLKRADRNVPAHVFELFP 120 Query: 120 VLKDFLNRYGGNLSGGQQQQLAIARALLAKPKVILLDEPTEGIQPNIVEQIENVIVSLNR 179 VLK L R GG+LSGGQQQQLAI RAL+ +PK+++LDEPTEGIQP+I++ I I L Sbjct: 121 VLKQMLGRRGGDLSGGQQQQLAIGRALVMRPKLLVLDEPTEGIQPSIIKDIGRAIRFLRD 180 Query: 180 ERGITVVLVEQNVAFARRASHRFALLEKGRVVAKGTIGEL 219 + GI V+LVEQ + F R + ++++G++V G +L Sbjct: 181 QAGIAVLLVEQYLDFCRELADEVNIMDRGQIVHTGPAEDL 220