BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0080.p (229 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2037 [E] COG0410 ABC-type branched-chain amino acid transport... 235 7e-62 mll0756 Non COG 224 1e-58 AGc4373 [E] COG0410 ABC-type branched-chain amino acid transport... 222 5e-58 YPO1191 [E] COG0410 ABC-type branched-chain amino acid transport... 219 3e-57 PA4862 [E] COG0410 ABC-type branched-chain amino acid transport ... 219 3e-57 >RSc2037 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 230 Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 117/230 (50%), Positives = 164/230 (71%), Gaps = 1/230 (0%) Query: 1 MLAINDLHVAYGQSEVLHGLNVSVAPNEIVAIMGRNGMGKTTLMKSLMGILPAKSGKVTM 60 ML I L+ YG S +L ++ V ++ A++GRNG+GKTTL+K LMG+LPA SG + Sbjct: 1 MLQIQQLNQYYGGSHILRNVSFEVPAGKLTALLGRNGVGKTTLLKCLMGVLPATSGTIDW 60 Query: 61 DGTELGAMKSYERVAKGLAYVPQGRMIFSTMTVKENIETGLVVS-GGSEVPGDIYELFPV 119 +G + + +YERV++GLAYVPQGR IF +TV+EN+ G S VP IY LFPV Sbjct: 61 EGRAIHKLPAYERVSRGLAYVPQGREIFPRLTVEENLLIGAAARRAPSGVPDSIYALFPV 120 Query: 120 LLEMKGRRGGNLSGGQQQQLAIARALATKPKVLLLDEPTEGIQPSIIKDMARTLKRIRDE 179 L +MKGRRGG+LSGGQQQQLAI RAL ++P++L+LDEPTEGIQPS+I+++ RTL+R+ DE Sbjct: 121 LAQMKGRRGGDLSGGQQQQLAIGRALMSEPRLLILDEPTEGIQPSVIQEIGRTLRRLVDE 180 Query: 180 RGLSIVVSEQVLSFALDIADRVLVIENGEIVRDEPRAGVDAAQISKYLSV 229 G+S+++ EQ FA IADR +V+ GE++ A +DA + + ++V Sbjct: 181 FGMSVLLVEQYYDFARRIADRYVVMRRGEVIAQGDGADMDADGVRELVAV 230 >mll0756 Non COG Length = 231 Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/231 (45%), Positives = 160/231 (69%), Gaps = 2/231 (0%) Query: 1 MLAINDLHVAYGQSEVLHGLNVSVAPNEIVAIMGRNGMGKTTLMKSLMGILPAKSGKVTM 60 ML +++ + YG ++ L G+++ +I ++GRNG+GKT+LM+S++G SG V Sbjct: 1 MLEVSNATLHYGAAQALRGVSLKAGAGKITCVLGRNGVGKTSLMRSIVGHHRLTSGSVAF 60 Query: 61 DGTELGAMKSYERVAKGLAYVPQGRMIFSTMTVKENIETGL--VVSGGSEVPGDIYELFP 118 +G L +Y+R G+A+VPQGR IF +TV+EN+E+G + VP ++ELFP Sbjct: 61 EGKALDRSAAYDRARSGIAFVPQGREIFPLLTVRENLESGFAPLKRADRNVPAHVFELFP 120 Query: 119 VLLEMKGRRGGNLSGGQQQQLAIARALATKPKVLLLDEPTEGIQPSIIKDMARTLKRIRD 178 VL +M GRRGG+LSGGQQQQLAI RAL +PK+L+LDEPTEGIQPSIIKD+ R ++ +RD Sbjct: 121 VLKQMLGRRGGDLSGGQQQQLAIGRALVMRPKLLVLDEPTEGIQPSIIKDIGRAIRFLRD 180 Query: 179 ERGLSIVVSEQVLSFALDIADRVLVIENGEIVRDEPRAGVDAAQISKYLSV 229 + G+++++ EQ L F ++AD V +++ G+IV P +D A + K+L+V Sbjct: 181 QAGIAVLLVEQYLDFCRELADEVNIMDRGQIVHTGPAEDLDRADVRKFLTV 231 >AGc4373 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 231 Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 104/231 (45%), Positives = 159/231 (68%), Gaps = 2/231 (0%) Query: 1 MLAINDLHVAYGQSEVLHGLNVSVAPNEIVAIMGRNGMGKTTLMKSLMGILPAKSGKVTM 60 ML + ++++ YG ++ L G+++ +I ++GRNG+GK++L++++ G P +G ++ Sbjct: 1 MLTVENINLHYGAAQALRGVSLKAEMGKITCVLGRNGVGKSSLLRAVTGQQPTSAGSISF 60 Query: 61 DGTELGAMKSYERVAKGLAYVPQGRMIFSTMTVKENIETGLVVSGGSE--VPGDIYELFP 118 DG L + Y R +G+ YVPQGR IF ++V+EN+E+G E +P DI+ LFP Sbjct: 61 DGAPLDGLAPYHRAKRGVGYVPQGREIFPLLSVQENLESGYAPLPRKERFIPDDIFSLFP 120 Query: 119 VLLEMKGRRGGNLSGGQQQQLAIARALATKPKVLLLDEPTEGIQPSIIKDMARTLKRIRD 178 VL M GRRGG+LSGGQQQQLAI RAL T+PK+L+LDEPTEGIQPSIIKD+ R +K +RD Sbjct: 121 VLQSMLGRRGGDLSGGQQQQLAIGRALVTRPKILVLDEPTEGIQPSIIKDIGRAIKYLRD 180 Query: 179 ERGLSIVVSEQVLSFALDIADRVLVIENGEIVRDEPRAGVDAAQISKYLSV 229 G++I++ EQ L F ++AD V +++ GEIV + +D + ++L+V Sbjct: 181 STGMAILLVEQYLDFCRELADYVYIMDRGEIVHEGLAETLDTPEARRHLTV 231 >YPO1191 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Ype Yersinia pestis Length = 232 Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 108/214 (50%), Positives = 152/214 (71%), Gaps = 3/214 (1%) Query: 1 MLAINDLHVAYGQSEVLHGLNVSVAPNEIVAIMGRNGMGKTTLMKSLMGILPAKSGKVTM 60 ML +N+L YG S +L GL E+ ++GRNG+GKTTL+K L+G++P K+G +T Sbjct: 1 MLQVNELDQYYGGSHILRGLTFEARVGEVTCLLGRNGVGKTTLLKCLIGLVPIKNGSITW 60 Query: 61 DGTELGAMKSYERVAKGLAYVPQGRMIFSTMTVKENIETGLVVSGGSE---VPGDIYELF 117 +G + ++RV +G+AYVPQGR IF +TV+ENI GL GS+ VP IY+LF Sbjct: 61 EGKNISHQSPHQRVKEGIAYVPQGREIFPRLTVEENILLGLSRFPGSQSKSVPEHIYQLF 120 Query: 118 PVLLEMKGRRGGNLSGGQQQQLAIARALATKPKVLLLDEPTEGIQPSIIKDMARTLKRIR 177 PVL EMK RRGG+LSGGQQQQLAI RALA +P++L+LDEPTEGIQPS+IK++ +K++ Sbjct: 121 PVLQEMKHRRGGDLSGGQQQQLAIGRALACQPRLLILDEPTEGIQPSVIKEIGGVIKKLA 180 Query: 178 DERGLSIVVSEQVLSFALDIADRVLVIENGEIVR 211 + ++I++ EQ FA ++AD LV+ G+IV+ Sbjct: 181 AQGDMAILLVEQFYDFAAELADNYLVMSRGKIVQ 214 >PA4862 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Pae Pseudomonas aeruginosa Length = 232 Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 107/214 (50%), Positives = 152/214 (71%), Gaps = 3/214 (1%) Query: 1 MLAINDLHVAYGQSEVLHGLNVSVAPNEIVAIMGRNGMGKTTLMKSLMGILPAKSGKVTM 60 ML ++ LH YG S +L GL+ E+ ++GRNG+GKTTL++ LMG++PA+ G+V Sbjct: 1 MLQVDKLHQYYGGSHILRGLSFEAKVGEVTCLLGRNGVGKTTLLRCLMGLVPAREGQVAW 60 Query: 61 DGTELGAMKSYERVAKGLAYVPQGRMIFSTMTVKENIETGLVVSGGSE---VPGDIYELF 117 +G L ++ ++RV G+AYVPQGR IF +TV+EN+ GL + VP IYELF Sbjct: 61 EGRSLTGLRPHQRVRAGIAYVPQGREIFPRLTVEENLLMGLSRFSARDARAVPDFIYELF 120 Query: 118 PVLLEMKGRRGGNLSGGQQQQLAIARALATKPKVLLLDEPTEGIQPSIIKDMARTLKRIR 177 PVL EMK RRGG+LSGGQQQQLAI RALA++P++L+LDEPTEGIQPS+IK++ ++ + Sbjct: 121 PVLREMKQRRGGDLSGGQQQQLAIGRALASQPRLLILDEPTEGIQPSVIKEIGAVVRSLA 180 Query: 178 DERGLSIVVSEQVLSFALDIADRVLVIENGEIVR 211 ++I++ EQ FA ++AD+ LV+ GEIV+ Sbjct: 181 ARGDMAILLVEQFYDFAAELADQYLVMARGEIVQ 214