BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0050.p         (167 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI0693 [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinam...   173   2e-43
mll1308 Non COG                                                       164   8e-41
VC1239 [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinamid...   152   3e-37
AGc2839 [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinami...   150   1e-36
SMc04305 [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinam...   136   2e-32

>BMEI0693 [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide
           phosphate guanylyltransferase Bme Brucella melitensis
          Length = 173

 Score =  173 bits (438), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/165 (54%), Positives = 109/165 (66%), Gaps = 1/165 (0%)

Query: 4   ILITGGARSGKSRRAELRARSFPGQPVYIATAEALDAEMDERIAKHRARRGNDWIEREVP 63
           IL+ GGARSGKS  AE    +   QP+Y+AT  A D EM+ RIA HR RRG  W   E P
Sbjct: 8   ILVLGGARSGKSSYAEKMVEASGLQPLYLATGRAFDTEMESRIAIHRERRGPQWQTVEEP 67

Query: 64  LDLVEVL-SETDGGGARLVDCLTLWLSNLLHAGRDWSQEVTRLANALSRQHGPVILVTNE 122
           LDLV  L +    G   LVDCLTLW++NL+ A RD + E  RL  AL    GPV+ V+NE
Sbjct: 68  LDLVTALKAHAAAGRFVLVDCLTLWITNLMMAERDMAAETVRLVAALPDLAGPVVFVSNE 127

Query: 123 VGLGIVPDNAMARTFRDAAGIMNQTIAGIADEVEFVVASLPMKLK 167
           VGLGIVP+N MAR FRD AG ++Q +A  ADEV F+ A LP+K+K
Sbjct: 128 VGLGIVPENRMAREFRDHAGFLHQAVAAAADEVYFMAAGLPLKMK 172


>mll1308 Non COG
          Length = 171

 Score =  164 bits (415), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 106/165 (64%)

Query: 3   VILITGGARSGKSRRAELRARSFPGQPVYIATAEALDAEMDERIAKHRARRGNDWIEREV 62
           +  I GGARSGKS  AE+   + P    YIATA+A D EM ERIA HR+RRG  W   + 
Sbjct: 7   LTFIIGGARSGKSAHAEILVTALPSPWTYIATAQAYDDEMRERIALHRSRRGEGWTTIDA 66

Query: 63  PLDLVEVLSETDGGGARLVDCLTLWLSNLLHAGRDWSQEVTRLANALSRQHGPVILVTNE 122
           PLDL   L         LVDCLTLWL+N + A  D +    RLA+ LSR  GP  +V+NE
Sbjct: 67  PLDLAGALEALPDNQPVLVDCLTLWLTNHMLADHDVAAACRRLADVLSRPRGPWFVVSNE 126

Query: 123 VGLGIVPDNAMARTFRDAAGIMNQTIAGIADEVEFVVASLPMKLK 167
           VG GIVPDNA+AR FRD AG +NQ +A IAD V  +VA LP+K++
Sbjct: 127 VGQGIVPDNALARRFRDDAGRLNQQVAAIADTVLLMVAGLPLKVR 171


>VC1239 [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide
           phosphate guanylyltransferase Vch Vibrio cholerae
          Length = 179

 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/177 (49%), Positives = 105/177 (59%), Gaps = 10/177 (5%)

Query: 1   MVVILITGGARSGKSRRAELRAR----SFPGQPVYIATAEALDAEMDERIAKHRARRGND 56
           M V  + GGARSGKS  AEL A+    +      Y+ATA ALD EM ERIA H+ARR  +
Sbjct: 1   MTVHFVLGGARSGKSSYAELLAKQTAQALGATLHYVATATALDDEMRERIAHHQARRTAE 60

Query: 57  WIEREVPLDLVEVLSETDGGGARLVDCLTLWLSNLLH------AGRDWSQEVTRLANALS 110
           W E EVPL L E L+        LVDCLTLWL+NLL             Q V  L  AL+
Sbjct: 61  WNEHEVPLALAEALTRFQRQDLVLVDCLTLWLNNLLFEHEAALCAARIEQHVDSLLAALA 120

Query: 111 RQHGPVILVTNEVGLGIVPDNAMARTFRDAAGIMNQTIAGIADEVEFVVASLPMKLK 167
           +    +ILV+NEVG+G+VP   + R F D AG MNQ IA +AD V FVVA LP +LK
Sbjct: 121 QTQAHIILVSNEVGMGVVPMGELTRMFVDHAGWMNQKIAALADSVTFVVAGLPQRLK 177


>AGc2839 [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide
           phosphate guanylyltransferase Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 173

 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 102/165 (61%), Gaps = 1/165 (0%)

Query: 4   ILITGGARSGKSRRAELRARSFPGQPVYIATAEALDAEMDERIAKHRARRGNDWIEREVP 63
           + I GGARSGKSR AE  A    G+  Y+AT  A D EM +RI+ H+ RRG +W   E P
Sbjct: 8   VFILGGARSGKSRFAEELAGKAGGRLHYLATGRAWDDEMRDRISHHQERRGGEWTTHEAP 67

Query: 64  LDLVEVLSETDG-GGARLVDCLTLWLSNLLHAGRDWSQEVTRLANALSRQHGPVILVTNE 122
           +D+  VL   D      L+DCLTLWL+NL+    D       L  A+      +ILV+NE
Sbjct: 68  VDIATVLQRLDSPDSVILIDCLTLWLTNLMMENADMETAFAELEAAIVSTRAKLILVSNE 127

Query: 123 VGLGIVPDNAMARTFRDAAGIMNQTIAGIADEVEFVVASLPMKLK 167
           VGLGIVP+N MAR FRD AG ++Q +A IA EV FV A LP+K+K
Sbjct: 128 VGLGIVPENRMAREFRDHAGRLHQRVAAIAGEVYFVAAGLPLKMK 172


>SMc04305 [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide
           phosphate guanylyltransferase Sme Sinorhizobium meliloti
          Length = 175

 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/166 (50%), Positives = 106/166 (63%), Gaps = 4/166 (2%)

Query: 5   LITGGARSGKSRRAELRARSFPGQPV-YIATAEALDAEMDERIAKHRA-RRGNDWIEREV 62
           L+ GGARSGKS  AE    +  G P+ Y+AT  A D EM ERIA H+A R+G  W   E 
Sbjct: 10  LVLGGARSGKSTFAEKLVEA-TGSPMHYLATGRAFDEEMQERIALHQATRQGKGWTTHEE 68

Query: 63  PLDLVEVLSETDGGG-ARLVDCLTLWLSNLLHAGRDWSQEVTRLANALSRQHGPVILVTN 121
           PLDLV +L   D  G A L+DCLTLW++NL+   RD + E   LA  L      ++ V+N
Sbjct: 69  PLDLVGLLRRIDEPGRAVLIDCLTLWVTNLMMEERDMAAEFAALAAFLPEARSRLVFVSN 128

Query: 122 EVGLGIVPDNAMARTFRDAAGIMNQTIAGIADEVEFVVASLPMKLK 167
           EVGLGIVP+N MAR FRD AG ++Q +A  + EV FV A LP+K+K
Sbjct: 129 EVGLGIVPENRMARDFRDHAGRLHQIVAEKSAEVYFVAAGLPLKMK 174