BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0008.p         (94 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cgl1286_1 [LR] COG0494 NTP pyrophosphohydrolases including oxida...    64   9e-11
MT3063_1 [LR] COG0494 NTP pyrophosphohydrolases including oxidat...    60   1e-09
Rv2985_1 [LR] COG0494 NTP pyrophosphohydrolases including oxidat...    60   1e-09

>Cgl1286_1 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Cgl Corynebacterium glutamicum
          Length = 194

 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 4/85 (4%)

Query: 5   PVLAAGGIVLRRE-TPP---RFAVVRLRKRNEWVLPKGKLDDGETPRAAAEREVLEETGH 60
           P LAAG ++ R + T P     AV+     ++W L KGK+D GE+    A RE+LEETG+
Sbjct: 62  PTLAAGAVLWRGDITNPDSIEVAVIHRPHYDDWSLAKGKVDPGESIPTTAAREILEETGY 121

Query: 61  DVDVHEFLGTLVYDSGGRSKVVHYW 85
           D+ + + +G + Y    R+KVV+YW
Sbjct: 122 DIRLGKLIGKVTYPVLDRTKVVYYW 146


>MT3063_1 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes MtC Mycobacterium tuberculosis CDC1551
          Length = 150

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 8/88 (9%)

Query: 6   VLAAGGIVLR-----RETPPRFAVVRLRKRNEWVLPKGKLDDGETPRAAAEREVLEETGH 60
           V AAG ++ R      E P   AV+   + ++W LPKGK+D GET    A RE+LEETGH
Sbjct: 17  VYAAGAVLWRPGSADSEGPVEIAVIHRPRYDDWSLPKGKVDPGETAPVGAVREILEETGH 76

Query: 61  DVDVHEFLGTLVY--DSGGRS-KVVHYW 85
             ++   L T+ Y  DS  R  K VHYW
Sbjct: 77  RANLGRRLLTVTYPTDSPFRGVKKVHYW 104


>Rv2985_1 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Mtu Mycobacterium tuberculosis H37Rv
          Length = 150

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 8/88 (9%)

Query: 6   VLAAGGIVLR-----RETPPRFAVVRLRKRNEWVLPKGKLDDGETPRAAAEREVLEETGH 60
           V AAG ++ R      E P   AV+   + ++W LPKGK+D GET    A RE+LEETGH
Sbjct: 17  VYAAGAVLWRPGSADSEGPVEIAVIHRPRYDDWSLPKGKVDPGETAPVGAVREILEETGH 76

Query: 61  DVDVHEFLGTLVY--DSGGRS-KVVHYW 85
             ++   L T+ Y  DS  R  K VHYW
Sbjct: 77  RANLGRRLLTVTYPTDSPFRGVKKVHYW 104