BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0060.p         (87 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc02184 [K] COG1396 Predicted transcriptional regulators Sme Si...    71   5e-13

>SMc02184 [K] COG1396 Predicted transcriptional regulators Sme
          Sinorhizobium meliloti
          Length = 89

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 54/83 (65%)

Query: 1  VAYNVRRIRVERGIPQEQLAYDAGVDRSYMSGLERQQANPTIDLLDRLAETLGIAVCELF 60
          + +N+R +RVERG+ QE+LA++A +DR+Y+  +ER   N TI  ++ LA  L + V  LF
Sbjct: 7  MGWNLRLLRVERGLSQERLAFEARIDRAYVGRVERGMENVTISTIEALARALEVPVAALF 66

Query: 61 VRPSKGAPPPSTLPKGRKPKPAR 83
           +P + A  P  L  GRKPK ++
Sbjct: 67 SQPDRNASQPKPLRPGRKPKGSK 89