BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0048.p         (88 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr5884 [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphoryl...   101   5e-22
mlr9119 [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphoryl...    92   3e-19

>mlr5884 [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase
           involved in lipopolysaccharide biosynthesis/translation
           initiation factor 2B, gamma/epsilon subunits
           (eIF-2Bgamma/eIF-2Bepsilon) Mlo Mesorhizobium loti
          Length = 272

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 59/71 (83%)

Query: 1   LRFAASTLRNTIVPALNEIIGSGATRAYTEELLAFLIERRGLQLAATRCDGLKWYEIDTP 60
           +RF+ + L+  IVP L+++IGSGA +AYTEELLA LIE+RGLQLAA RCD L+WYEID+ 
Sbjct: 182 IRFSGAELQTAIVPVLHDLIGSGAIKAYTEELLAHLIEQRGLQLAAARCDDLRWYEIDSE 241

Query: 61  ADLQIAETIFA 71
            DL++AE IFA
Sbjct: 242 QDLRVAERIFA 252


>mlr9119 [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase
           involved in lipopolysaccharide biosynthesis/translation
           initiation factor 2B, gamma/epsilon subunits
           (eIF-2Bgamma/eIF-2Bepsilon) Mlo Mesorhizobium loti
          Length = 270

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query: 1   LRFAASTLRNTIVPALNEIIGSGATRAYTEELLAFLIERRGLQLAATRCDGLKWYEIDTP 60
            RF+  TL  T+VP LNE+I +G T  YTE+LLA+LI +RG++LAA RCD ++WYEID  
Sbjct: 183 FRFSIGTLSKTLVPTLNELIEAGNTTIYTEQLLAYLITKRGMKLAAARCDHVRWYEIDCV 242

Query: 61  ADLQIAETIF 70
           ADL+IAE IF
Sbjct: 243 ADLRIAEEIF 252