BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0129.p (313 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2599 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 220 3e-57 PA2595 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 208 1e-53 AGpT163 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 207 4e-53 PA2596 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 182 7e-46 Cgl1195 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 178 1e-44 >PA2599 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 314 Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 121/297 (40%), Positives = 179/297 (60%), Gaps = 1/297 (0%) Query: 13 AAVDGAAAQTTLRVGDQKG-NSQAVMEAAGVLKDVPYRIEWKEFAAAAPLLEALGAGAID 71 A++ AA TLRVGDQ N +A MEA+GVL+ PY++EWK F +AAP+ E L AGA+D Sbjct: 18 ASLAQAADLPTLRVGDQNYYNVRASMEASGVLEGAPYQVEWKHFQSAAPVAEGLQAGALD 77 Query: 72 TGLVGDAPFTFAAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLRGKKIATGRGSI 131 G +GD+ F F AA PVK + RQ+ D +A+LVP++S ++S DL+G+K+A G+ Sbjct: 78 LGFLGDSGFIFLAAKGAPVKLVGVSRQNPDTIALLVPKDSPVRSIADLKGRKVAYWPGAW 137 Query: 132 GHQLILAALESKGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVSQEEVLFKSRRI 191 QL L ALE G V+ V L P DA A +G++DA+ WEPY+SQ+ V+ +R I Sbjct: 138 SQQLTLRALEKAGLPKDYVEFVKLMPIDAAAALPRGSIDAFPVWEPYISQQIVVSGARPI 197 Query: 192 ITADGITPGLGFQVATPDAIKDKRAELEDFVRRLAAARAWSHNNVEGYAATWGRLMNIPP 251 +TA + PGL A +I+ +RA++ DF+ RL ARAW + E YA W + N+ Sbjct: 198 LTARDLMPGLSSIAANAASIEPRRAQIADFLGRLRKARAWVEAHKEQYADLWAQKANLDR 257 Query: 252 AVPLNWLTRAKIRIAPIDDGVVADEQKTIDLYDRWGLIRQKINAADIVDRSFGAAVE 308 AV +W+ +A + + P+D D Q+T D + G + + + + ++D SF A Sbjct: 258 AVSRHWIGQAGMSVGPVDAQAATDYQETADFLLQTGALPKPFDTSTVIDTSFNEAFH 314 >PA2595 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 318 Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 122/276 (44%), Positives = 176/276 (63%), Gaps = 2/276 (0%) Query: 21 QTTLRVGDQKGNSQAVMEAAGVLKDVPYRIEWKEFAAAAPLLEALGAGAIDTGLVGDAPF 80 + TLR+ DQKGN +A +EAAG L D+ Y I W EF AAAPL EAL AGA+D G++GDAP Sbjct: 23 RVTLRLADQKGNMRAQLEAAGALDDLTYDIRWFEFPAAAPLAEALNAGAVDAGIIGDAPL 82 Query: 81 TFAAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLRGKKIATGRGSIGHQLILAAL 140 FA AA +KAIA + G AVLV +S ++S +DL+G++IATGRGSIGH + L AL Sbjct: 83 LFALAAGARLKAIAVDKSDPYGTAVLVRGDSPLRSANDLKGQRIATGRGSIGHFVALKAL 142 Query: 141 ESKGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVSQEEVLFKSRRIITADGITPG 200 S G DV+ FL P DAK+A G+VDAW+TWEPY + E K+R ++ G+ G Sbjct: 143 ASVGLGEKDVEFRFLGPVDAKMALANGSVDAWATWEPYTAFAETADKARVLVDGRGLWAG 202 Query: 201 LGFQVATPDAIKD--KRAELEDFVRRLAAARAWSHNNVEGYAATWGRLMNIPPAVPLNWL 258 F AT A+ D KRA L+D+++RLA+A+ W++ +++ Y+ + +++ P Sbjct: 203 NSFLAATDSALADPAKRAVLQDYLQRLASAQRWAYLHLDEYSRSLAQIIGFPEDAARLQF 262 Query: 259 TRAKIRIAPIDDGVVADEQKTIDLYDRWGLIRQKIN 294 R ++R +D+ + +Q+T D Y GLI Q+++ Sbjct: 263 ERRRLRWQALDERTLGQQQETADFYQAHGLIPQRLD 298 >AGpT163 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 311 Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 140/303 (46%), Positives = 192/303 (63%), Gaps = 4/303 (1%) Query: 1 MIRLIVAAALALAAVDGAAAQTTLRVGDQKGNSQAVMEAAGVLKDVPYRIEWKEFAAAAP 60 +IRL ++ AL++AA A+AQ LRVGDQ+GN++AVM+A+GVLKDVPY++EW EFA AAP Sbjct: 7 IIRLALSLALSVAAT-VASAQDVLRVGDQRGNARAVMDASGVLKDVPYQVEWSEFANAAP 65 Query: 61 LLEALGAGAIDTGLVGDAPFTFAAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLR 120 LLEAL A A+D G VGDAP TFAAA + KAI A + +G A++V ++ + DL Sbjct: 66 LLEALAAEALDAGSVGDAPLTFAAARGVKAKAIFATKY--EGNAIIVKNDAPYQGIKDLV 123 Query: 121 GKKIATGRGSIGHQLILAALESKGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVS 180 KK+A +GS GH LIL +L+ G + + VFL P++A +A T G+VDA S WEPY+S Sbjct: 124 RKKVAFVKGSAGHALILQSLKEAGLKEDAITPVFLPPAEATLALTNGSVDAVSLWEPYIS 183 Query: 181 QEEVLFKSRRIITADGITPGLGFQVATPDAIKDKRAELEDFVRRLAAARAWSHNNVEGYA 240 L RII P L + +A+ AI+ KR L+DFV R A ARAW + + Y+ Sbjct: 184 -FATLKSGARIIVDGKNYPSLSYFIASEAAIEGKRDILKDFVARSAKARAWGLEHPQEYS 242 Query: 241 ATWGRLMNIPPAVPLNWLTRAKIRIAPIDDGVVADEQKTIDLYDRWGLIRQKINAADIVD 300 +L+ IP V L TR + I+ V +Q TIDLY G+I +K+ A+D++D Sbjct: 243 KIIAQLVKIPDDVALGKQTRERHAPQLINADVEKLQQSTIDLYYGAGIIDKKLKASDLLD 302 Query: 301 RSF 303 SF Sbjct: 303 DSF 305 >PA2596 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 328 Score = 182 bits (463), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 157/287 (54%) Query: 23 TLRVGDQKGNSQAVMEAAGVLKDVPYRIEWKEFAAAAPLLEALGAGAIDTGLVGDAPFTF 82 +LR+GD KG+ A + A+G L D+PY++E F + AP+LEAL AGA+D G GD PF F Sbjct: 28 SLRLGDVKGDRYAALRASGELDDLPYKLEMSAFPSGAPVLEALNAGALDIGFTGDIPFLF 87 Query: 83 AAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLRGKKIATGRGSIGHQLILAALES 142 AA P+KA+ A + +A++V ++S I+S L+GK+IA RG GH L L AL Sbjct: 88 VYAAGAPLKAVGAWHFNPATVALVVGKDSPIRSVAGLKGKRIAVNRGGWGHFLALGALRR 147 Query: 143 KGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVSQEEVLFKSRRIITADGITPGLG 202 G DV FL P D + A +G+VDAW WEPY S +L ++R I GI G Sbjct: 148 AGLGPQDVSFSFLGPVDGRAALVRGSVDAWVPWEPYTSSAVLLDQARVIDNGAGIMTGYS 207 Query: 203 FQVATPDAIKDKRAELEDFVRRLAAARAWSHNNVEGYAATWGRLMNIPPAVPLNWLTRAK 262 + +A+ AI K+A + D + RLA A+AW+ + E +A + +N+P V W+ A+ Sbjct: 208 YALASDAAIARKKAAISDLLTRLARAQAWALRHPEAFAEALAKDLNMPREVTRRWVGEAR 267 Query: 263 IRIAPIDDGVVADEQKTIDLYDRWGLIRQKINAADIVDRSFGAAVEQ 309 I V A Q D + G++ + + A D S A + Sbjct: 268 ISPVVFGPEVAATLQTAADFFHAEGVLPKSLEVAPAFDFSLSAGAAE 314 >Cgl1195 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Cgl Corynebacterium glutamicum Length = 319 Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 113/318 (35%), Positives = 166/318 (52%), Gaps = 22/318 (6%) Query: 2 IRLIVAAALALAAVDGAA-------------AQTTLRVGDQKGNSQAVMEAAGVLKDVPY 48 I L++A L LA+ A+ ++ TL +GDQ ++ V++A+G L DVPY Sbjct: 6 IALVLAFGLGLASCSSASGDPATNADGSIDLSKVTLNIGDQIAGTEQVLQASGELDDVPY 65 Query: 49 RIEWKEFAAAAPLLEALGAGAIDTGLVGDAPFTFAAAAKIPVKAIAAVRQSRDGLAVLVP 108 +IEW F + P +EAL AG ID + G+ P K ++A G +LV Sbjct: 66 KIEWSSFTSGPPQIEALNAGQIDFAITGNTPPIIGGPTN--TKVVSAYNNDALGDVILVA 123 Query: 109 ENSAIKSFDDLRGKKIATGRGSIGHQLILAALESKGWQASDVQIVFLAPSDAKVAYTQGA 168 +S+I S DL GKK+A RGS H ++ LE G DV+I L PSDAK A+ G Sbjct: 124 PDSSITSVADLAGKKVAVARGSSAHGHLIQQLEKAGVSVDDVEINLLQPSDAKAAFQNGQ 183 Query: 169 VDAWSTWEPYVSQEEVLFKSRRIITADGITPGLGFQVATPDAIKD--KRAELEDFVRRLA 226 VDAW+ W+PY SQ E L ++ ++ G+ G GF VA+ +A+ D K A L DF+ R+A Sbjct: 184 VDAWAVWDPYSSQAE-LEGAQVLVRGAGLVSGHGFGVASDEALDDPAKEAALADFLDRVA 242 Query: 227 AARAWSHNNVEGYAATWGRLMNI-PPAVPLNWLTRAKIRIAPIDDGVVADEQKTIDLYDR 285 + W+ +N + +A + + P A LN TR+ P+D+ V + ID + Sbjct: 243 DSYEWAEDNTDEWATIFSQESGFDPEASQLN--TRSLRHQVPLDESVNTYQNALIDAFVS 300 Query: 286 WGLIRQKINAADIVDRSF 303 GL+ + N D VD F Sbjct: 301 AGLV-EDFNFEDTVDTRF 317