BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0121.p (328 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2596 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 241 2e-63 PA2595 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 214 2e-55 AGpT163 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 192 1e-48 PA2599 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 191 2e-48 Cgl1195 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 144 2e-34 >PA2596 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 328 Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 133/287 (46%), Positives = 184/287 (64%) Query: 40 IVLRVGDQKGGNRSLLEISGLAKDLPYKIEWSEFPAAAPILEAINAGALDVGYTGDLSFL 99 I LR+GD KG + L SG DLPYK+E S FP+ AP+LEA+NAGALD+G+TGD+ FL Sbjct: 27 ISLRLGDVKGDRYAALRASGELDDLPYKLEMSAFPSGAPVLEALNAGALDIGFTGDIPFL 86 Query: 100 TVYASGAPIKAIGGTRSDARTQAILVRGDSPIKTAADLKGKRLAGTRGGWGQFLINATLE 159 VYA+GAP+KA+G + T A++V DSPI++ A LKGKR+A RGGWG FL L Sbjct: 87 FVYAAGAPLKAVGAWHFNPATVALVVGKDSPIRSVAGLKGKRIAVNRGGWGHFLALGALR 146 Query: 160 KAGSRIEDATFAPLGPVDAKIALLAGSIDAWAVWEPYISYATLKDKARVVADGEGLTPTI 219 +AG +D +F+ LGPVD + AL+ GS+DAW WEPY S A L D+ARV+ +G G+ Sbjct: 147 RAGLGPQDVSFSFLGPVDGRAALVRGSVDAWVPWEPYTSSAVLLDQARVIDNGAGIMTGY 206 Query: 220 TFIVASDNAIATKRAAVQDLVQRLNKARLWSLDHLAEYARNTAELTKLPEDVLLAAYTAQ 279 ++ +ASD AIA K+AA+ DL+ RL +A+ W+L H +A A+ +P +V Sbjct: 207 SYALASDAAIARKKAAISDLLTRLARAQAWALRHPEAFAEALAKDLNMPREVTRRWVGEA 266 Query: 280 KTSPIAIDEGVVKEVQAASDRATRYGILGKTLDVGKAVDRSFTASAS 326 + SP+ V +Q A+D G+L K+L+V A D S +A A+ Sbjct: 267 RISPVVFGPEVAATLQTAADFFHAEGVLPKSLEVAPAFDFSLSAGAA 313 >PA2595 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 318 Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 128/282 (45%), Positives = 176/282 (62%), Gaps = 2/282 (0%) Query: 34 ALAADAIVLRVGDQKGGNRSLLEISGLAKDLPYKIEWSEFPAAAPILEAINAGALDVGYT 93 A A + + LR+ DQKG R+ LE +G DL Y I W EFPAAAP+ EA+NAGA+D G Sbjct: 18 ACADERVTLRLADQKGNMRAQLEAAGALDDLTYDIRWFEFPAAAPLAEALNAGAVDAGII 77 Query: 94 GDLSFLTVYASGAPIKAIGGTRSDARTQAILVRGDSPIKTAADLKGKRLAGTRGGWGQFL 153 GD L A+GA +KAI +SD A+LVRGDSP+++A DLKG+R+A RG G F+ Sbjct: 78 GDAPLLFALAAGARLKAIAVDKSDPYGTAVLVRGDSPLRSANDLKGQRIATGRGSIGHFV 137 Query: 154 INATLEKAGSRIEDATFAPLGPVDAKIALLAGSIDAWAVWEPYISYATLKDKARVVADGE 213 L G +D F LGPVDAK+AL GS+DAWA WEPY ++A DKARV+ DG Sbjct: 138 ALKALASVGLGEKDVEFRFLGPVDAKMALANGSVDAWATWEPYTAFAETADKARVLVDGR 197 Query: 214 GLTPTITFIVASDNAIA--TKRAAVQDLVQRLNKARLWSLDHLAEYARNTAELTKLPEDV 271 GL +F+ A+D+A+A KRA +QD +QRL A+ W+ HL EY+R+ A++ PED Sbjct: 198 GLWAGNSFLAATDSALADPAKRAVLQDYLQRLASAQRWAYLHLDEYSRSLAQIIGFPEDA 257 Query: 272 LLAAYTAQKTSPIAIDEGVVKEVQAASDRATRYGILGKTLDV 313 + ++ A+DE + + Q +D +G++ + LDV Sbjct: 258 ARLQFERRRLRWQALDERTLGQQQETADFYQAHGLIPQRLDV 299 >AGpT163 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 311 Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 125/304 (41%), Positives = 186/304 (61%), Gaps = 4/304 (1%) Query: 20 ALITAVITLSTSAAALAADAI-VLRVGDQKGGNRSLLEISGLAKDLPYKIEWSEFPAAAP 78 ++I ++L+ S AA A A VLRVGDQ+G R++++ SG+ KD+PY++EWSEF AAP Sbjct: 6 SIIRLALSLALSVAATVASAQDVLRVGDQRGNARAVMDASGVLKDVPYQVEWSEFANAAP 65 Query: 79 ILEAINAGALDVGYTGDLSFLTVYASGAPIKAIGGTRSDARTQAILVRGDSPIKTAADLK 138 +LEA+ A ALD G GD A G KAI T+ + AI+V+ D+P + DL Sbjct: 66 LLEALAAEALDAGSVGDAPLTFAAARGVKAKAIFATKYEG--NAIIVKNDAPYQGIKDLV 123 Query: 139 GKRLAGTRGGWGQFLINATLEKAGSRIEDATFAPLGPVDAKIALLAGSIDAWAVWEPYIS 198 K++A +G G LI +L++AG + + T L P +A +AL GS+DA ++WEPYIS Sbjct: 124 RKKVAFVKGSAGHALILQSLKEAGLKEDAITPVFLPPAEATLALTNGSVDAVSLWEPYIS 183 Query: 199 YATLKDKARVVADGEGLTPTITFIVASDNAIATKRAAVQDLVQRLNKARLWSLDHLAEYA 258 +ATLK AR++ DG+ P++++ +AS+ AI KR ++D V R KAR W L+H EY+ Sbjct: 184 FATLKSGARIIVDGKNY-PSLSYFIASEAAIEGKRDILKDFVARSAKARAWGLEHPQEYS 242 Query: 259 RNTAELTKLPEDVLLAAYTAQKTSPIAIDEGVVKEVQAASDRATRYGILGKTLDVGKAVD 318 + A+L K+P+DV L T ++ +P I+ V K Q+ D GI+ K L +D Sbjct: 243 KIIAQLVKIPDDVALGKQTRERHAPQLINADVEKLQQSTIDLYYGAGIIDKKLKASDLLD 302 Query: 319 RSFT 322 SF+ Sbjct: 303 DSFS 306 >PA2599 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 314 Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 119/304 (39%), Positives = 165/304 (54%), Gaps = 2/304 (0%) Query: 21 LITAVITLSTSAA-ALAADAIVLRVGDQKGGN-RSLLEISGLAKDLPYKIEWSEFPAAAP 78 L+T+ TL A+ A AAD LRVGDQ N R+ +E SG+ + PY++EW F +AAP Sbjct: 7 LLTSFATLLLGASLAQAADLPTLRVGDQNYYNVRASMEASGVLEGAPYQVEWKHFQSAAP 66 Query: 79 ILEAINAGALDVGYTGDLSFLTVYASGAPIKAIGGTRSDARTQAILVRGDSPIKTAADLK 138 + E + AGALD+G+ GD F+ + A GAP+K +G +R + T A+LV DSP+++ ADLK Sbjct: 67 VAEGLQAGALDLGFLGDSGFIFLAAKGAPVKLVGVSRQNPDTIALLVPKDSPVRSIADLK 126 Query: 139 GKRLAGTRGGWGQFLINATLEKAGSRIEDATFAPLGPVDAKIALLAGSIDAWAVWEPYIS 198 G+++A G W Q L LEKAG + F L P+DA AL GSIDA+ VWEPYIS Sbjct: 127 GRKVAYWPGAWSQQLTLRALEKAGLPKDYVEFVKLMPIDAAAALPRGSIDAFPVWEPYIS 186 Query: 199 YATLKDKARVVADGEGLTPTITFIVASDNAIATKRAAVQDLVQRLNKARLWSLDHLAEYA 258 + AR + L P ++ I A+ +I +RA + D + RL KAR W H +YA Sbjct: 187 QQIVVSGARPILTARDLMPGLSSIAANAASIEPRRAQIADFLGRLRKARAWVEAHKEQYA 246 Query: 259 RNTAELTKLPEDVLLAAYTAQKTSPIAIDEGVVKEVQAASDRATRYGILGKTLDVGKAVD 318 A+ L V S +D + Q +D + G L K D +D Sbjct: 247 DLWAQKANLDRAVSRHWIGQAGMSVGPVDAQAATDYQETADFLLQTGALPKPFDTSTVID 306 Query: 319 RSFT 322 SF Sbjct: 307 TSFN 310 >Cgl1195 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Cgl Corynebacterium glutamicum Length = 319 Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 121/223 (54%), Gaps = 9/223 (4%) Query: 40 IVLRVGDQKGGNRSLLEISGLAKDLPYKIEWSEFPAAAPILEAINAGALDVGYTGDLSFL 99 + L +GDQ G +L+ SG D+PYKIEWS F + P +EA+NAG +D TG+ + Sbjct: 39 VTLNIGDQIAGTEQVLQASGELDDVPYKIEWSSFTSGPPQIEALNAGQIDFAITGNTPPI 98 Query: 100 TVYASGAPI--KAIGGTRSDARTQAILVRGDSPIKTAADLKGKRLAGTRGGWGQFLINAT 157 G P K + +DA ILV DS I + ADL GK++A RG + Sbjct: 99 I----GGPTNTKVVSAYNNDALGDVILVAPDSSITSVADLAGKKVAVARGSSAHGHLIQQ 154 Query: 158 LEKAGSRIEDATFAPLGPVDAKIALLAGSIDAWAVWEPYISYATLKDKARVVADGEGLTP 217 LEKAG ++D L P DAK A G +DAWAVW+PY S A L+ A+V+ G GL Sbjct: 155 LEKAGVSVDDVEINLLQPSDAKAAFQNGQVDAWAVWDPYSSQAELE-GAQVLVRGAGLVS 213 Query: 218 TITFIVASDNAI--ATKRAAVQDLVQRLNKARLWSLDHLAEYA 258 F VASD A+ K AA+ D + R+ + W+ D+ E+A Sbjct: 214 GHGFGVASDEALDDPAKEAALADFLDRVADSYEWAEDNTDEWA 256