BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0106.p (299 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc4553 [G] COG1175 ABC-type sugar transport systems, permease c... 379 e-105 YPO1894 [G] COG1175 ABC-type sugar transport systems, permease c... 193 5e-49 mlr7264 [G] COG1175 ABC-type sugar transport systems, permease c... 164 2e-40 TM0278 [G] COG1175 ABC-type sugar transport systems, permease co... 163 3e-40 mll5301 [G] COG1175 ABC-type sugar transport systems, permease c... 158 1e-38 >AGc4553 [G] COG1175 ABC-type sugar transport systems, permease components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 312 Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/272 (69%), Positives = 221/272 (81%), Gaps = 5/272 (1%) Query: 27 ENASKQESRAAGSGDVAPAREWRPPSYWPFVIPALVVVLAVIIFPWVFTIWMSLQEWKVG 86 EN SRA GS P R P+YWPFVIPALVV+ AVI+FPWVFT+WMS+ W +G Sbjct: 7 ENTKTGVSRAEGS---RPPR--LAPNYWPFVIPALVVISAVIVFPWVFTLWMSVHRWTLG 61 Query: 87 SPTVFVGLANYLRLPTDPRFVEAVGHTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLR 146 F+G NY+RL +D RF E++ HTL YT LSVV PL GTLAA+VF +F RGFLR Sbjct: 62 QEQSFIGFDNYIRLASDLRFWESLWHTLIYTVLSVVAPLFLGTLAALVFDAQFPLRGFLR 121 Query: 147 GIFIMPMMATPVAIALVWTMMFHPQLGVLNYVLSLVGLPPQLWVFNPATVIPSLVLVETW 206 G+F+MPMMATPVAIALVWTMMFHPQLGVLNY+LSL+G+ P W++N +TVIPSLVLVETW Sbjct: 122 GVFVMPMMATPVAIALVWTMMFHPQLGVLNYLLSLIGIGPLEWIYNQSTVIPSLVLVETW 181 Query: 207 QWTPLVMLIVLGGLAAIPTEPYESAQIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAV 266 QWTPLVMLIVLGGLAA+P EPYESA+IDGAN WQ FR++T+P+I PFL IA +IR IDAV Sbjct: 182 QWTPLVMLIVLGGLAAVPREPYESAEIDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAV 241 Query: 267 KSFDIIFAITQGGPGSASETINVYLYSVAFVY 298 KSFDII+A+TQGGPG+ASETIN+YLY+ AF Y Sbjct: 242 KSFDIIYAMTQGGPGTASETINIYLYNTAFSY 273 >YPO1894 [G] COG1175 ABC-type sugar transport systems, permease components Ype Yersinia pestis Length = 286 Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 89/225 (39%), Positives = 147/225 (65%), Gaps = 2/225 (0%) Query: 74 FTIWMSLQEWKVGSPT--VFVGLANYLRLPTDPRFVEAVGHTLSYTALSVVLPLVFGTLA 131 + I++S+ + + SP F+G+AN++ + +PR ++ +TL Y A S V LV G+ Sbjct: 28 YAIYLSVHDIDLMSPPPFDFIGMANFIEVLQEPRMWSSLWNTLVYVAGSTVAELVLGSAI 87 Query: 132 AVVFHQKFAARGFLRGIFIMPMMATPVAIALVWTMMFHPQLGVLNYVLSLVGLPPQLWVF 191 A+ + F R +R + ++PM+ TP+ L+W + + P G+ N++ L+G+PP W+ Sbjct: 88 ALFISRDFFGRKLVRALLLLPMIVTPIVAGLIWRIFYDPNAGLFNWLAGLIGIPPIDWLG 147 Query: 192 NPATVIPSLVLVETWQWTPLVMLIVLGGLAAIPTEPYESAQIDGANFWQVFRFITLPLIM 251 NP+T + SL+L + WQWTP ++L+V GL A+P+EP E+A++DGA W++ FI LP++ Sbjct: 148 NPSTAMASLILADIWQWTPFIILLVSAGLDALPSEPLEAAELDGARGWRLLAFIKLPMMK 207 Query: 252 PFLFIAGMIRMIDAVKSFDIIFAITQGGPGSASETINVYLYSVAF 296 P + +A +RMIDA KSFD+I+ +T+GGP A+ET N+Y Y F Sbjct: 208 PIILMALFLRMIDAFKSFDLIYVMTRGGPALATETTNMYAYLTGF 252 >mlr7264 [G] COG1175 ABC-type sugar transport systems, permease components Mlo Mesorhizobium loti Length = 307 Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 149/242 (61%), Gaps = 5/242 (2%) Query: 55 PFVI--PALVVVLAVIIFPWVFTIWMSLQEWKVGSP--TVFVGLANYLRLPTDPRFVEAV 110 P+V+ PAL+V + ++I P++ ++ S Q +++ P F NY+ TDP+F + Sbjct: 22 PYVLSLPALLVCIGILI-PFLTSVVYSFQRYRLSQPWARQFNWGDNYISFFTDPKFWNTL 80 Query: 111 GHTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLRGIFIMPMMATPVAIALVWTMMFHP 170 +L Y +VVL L+ G A++ ++ F+ + +MP+M P AL+W +M +P Sbjct: 81 KVSLLYAGTTVVLELLLGLAIAMLLQKRSTLNNFISIMLLMPLMTAPALAALMWKLMTNP 140 Query: 171 QLGVLNYVLSLVGLPPQLWVFNPATVIPSLVLVETWQWTPLVMLIVLGGLAAIPTEPYES 230 GVL+Y+ SL+GL W +P+T + ++VLV+ W +TP +M+++L GL ++PT+P+E+ Sbjct: 141 GFGVLSYLASLIGLQDFRWASSPSTALFTVVLVDIWVYTPFIMILLLAGLRSLPTQPFEA 200 Query: 231 AQIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAVKSFDIIFAITQGGPGSASETINVY 290 A +DG VF ITLP++ P++ A + R++D+++ FDII+A+TQGGPG V Sbjct: 201 AALDGVPRSFVFFRITLPMLTPYILTATLFRLLDSIQQFDIIYAMTQGGPGDTLTVFQVE 260 Query: 291 LY 292 Y Sbjct: 261 AY 262 >TM0278 [G] COG1175 ABC-type sugar transport systems, permease components Tma Thermotoga maritima Length = 294 Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 147/244 (60%), Gaps = 3/244 (1%) Query: 54 WPFVIPALVVVLAVIIFPWVFTIWMSLQEWKVG--SPTVFVGLANYLRLPTDPRFVEAVG 111 W V+P L + LA+ I+P+ F IW S +++ + + T F+GL+NY ++ D +E++ Sbjct: 8 WLMVLPVLALFLAMTIYPFGFMIWASFRDYDLSKSAETHFIGLSNYFQIFRDSTAIESMK 67 Query: 112 HTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLRGIFIMPMMATPVAIALVWTMMFHPQ 171 T +++V + LV G L A + + +R ++PMM P + W M+++ Sbjct: 68 FTAKLLSIAVPVELVLGVLIAFLI-RGVKGEKIIRSSLLIPMMIPPAVSGVAWKMLYNFA 126 Query: 172 LGVLNYVLSLVGLPPQLWVFNPATVIPSLVLVETWQWTPLVMLIVLGGLAAIPTEPYESA 231 G +N+ LSL G+P W+ +P +++++ WQWTP + L++ GL +IP + ++A Sbjct: 127 FGPVNWFLSLFGVPKISWLGDPFYAQLGIIIIDVWQWTPFIFLMIYAGLQSIPQDLIDAA 186 Query: 232 QIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAVKSFDIIFAITQGGPGSASETINVYL 291 ++DGA++ +VF + PL+ P + +A ++R+ID +K+FDI+F T GGPGSA+ T + Y+ Sbjct: 187 RVDGADWGRVFLHVEFPLLRPLILVALVLRIIDCLKTFDIVFMTTWGGPGSATHTYSFYI 246 Query: 292 YSVA 295 Y V Sbjct: 247 YKVG 250 >mll5301 [G] COG1175 ABC-type sugar transport systems, permease components Mlo Mesorhizobium loti Length = 315 Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/249 (35%), Positives = 146/249 (58%), Gaps = 6/249 (2%) Query: 54 WPFVIPALVVVLAVIIFPWVFTIWMSLQEWKVGSPTVFV---GLANYLRLPTDPRFVEAV 110 W F+ P ++++LA+ IFP + I++S ++ P V G ANY R+ D A+ Sbjct: 31 WLFISPTILLLLAINIFPLFWAIYLSFTNYRANRPNEVVKNLGFANYQRILGDHDIWIAM 90 Query: 111 GHTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLRGIFIMPMMATPVAIALVWTMMFHP 170 T + +++L + G A + +KF F + ++PMM +P + W ++ P Sbjct: 91 QTTAHFVFWTILLETLIGFTLAWLIDRKFRGHAFWTTLILVPMMLSPAVVGNFWRFLYEP 150 Query: 171 QLGVLNYVLSLV-GLPP-QLWVFNPATVIP-SLVLVETWQWTPLVMLIVLGGLAAIPTEP 227 Q+G+ +YV+S V G+PP + + + ++ P S+++V+TW WTP VMLI L GL +IP Sbjct: 151 QIGLFSYVISFVSGIPPTSIQMLSNVSLAPWSIIIVDTWMWTPYVMLICLAGLRSIPEYI 210 Query: 228 YESAQIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAVKSFDIIFAITQGGPGSASETI 287 YE+A++D A+ W+ F ITLP+ +PF+ +A + R ID K FD++ +T GGPGS +E Sbjct: 211 YEAAEVDRASNWRQFWSITLPMALPFIMLAVLFRGIDNFKMFDMVNLLTGGGPGSTTEVA 270 Query: 288 NVYLYSVAF 296 ++ L AF Sbjct: 271 SITLKRQAF 279