BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0100.p (254 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1914 [S] COG2855 Predicted membrane protein Bme Brucella mel... 234 1e-61 AGc1202 [S] COG2855 Predicted membrane protein Atu Agrobacterium... 207 2e-53 lin2251 [S] COG2855 Predicted membrane protein Lin Listeria innocua 122 6e-28 mlr2225 [S] COG2855 Predicted membrane protein Mlo Mesorhizobium... 113 5e-25 yeiH [S] COG2855 Predicted membrane protein Eco Escherichia coli... 99 9e-21 >BMEI1914 [S] COG2855 Predicted membrane protein Bme Brucella melitensis Length = 357 Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 139/254 (54%), Positives = 187/254 (73%), Gaps = 15/254 (5%) Query: 2 ASGGLLIGAIAVTVVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEAD 61 A GL+ G IA V + + +SYG+ R+L L ++A+L+ACGNSICGNSAIAA+APVI A+ Sbjct: 114 AGSGLIFG-IAAVVAVAITLSYGIGRLLKLPHRMAVLVACGNSICGNSAIAAMAPVIGAE 172 Query: 62 GDDIASSISFTAILGVLMVLGLPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGIV 121 +D+A+SI+FTAILGV++VL LPLL+PLL L+ TQYGILAGLTVYAVPQVLAAT P ++ Sbjct: 173 SEDVAASIAFTAILGVIVVLTLPLLVPLLGLSFTQYGILAGLTVYAVPQVLAATAPVSLL 232 Query: 122 STQIGTLVKLVRVLMLGPIVIGLSLLVARRRKAGAAREGTSKAASISP--FKLVPWFIIG 179 S Q+GTLVKLVRVLMLGP+++ +L+ +K A + P F+LVPWFIIG Sbjct: 233 SVQLGTLVKLVRVLMLGPVILVFALI------------SGNKNADVKPGFFQLVPWFIIG 280 Query: 180 FLVLAALRSFQLVPDIAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGRVTAAVTLSL 239 FL + AL S L+P+ + + + +LT++SMAALGLGVD+R +++ GGRVT LSL Sbjct: 281 FLAMMALHSLHLIPEAILPAIQYASMLLTIISMAALGLGVDIRSVASAGGRVTLTAILSL 340 Query: 240 LLLLGLSIGLVHFF 253 + L +S+GL+H Sbjct: 341 IALCCISLGLIHML 354 >AGc1202 [S] COG2855 Predicted membrane protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 347 Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 122/217 (56%), Positives = 152/217 (70%), Gaps = 11/217 (5%) Query: 15 VVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEADGDDIASSISFTAI 74 V + L SY RMLGL KLA LIACGNSICGNSAIAA AP I A +D+A+SI+FTA+ Sbjct: 117 VALSLVFSYAAGRMLGLPPKLATLIACGNSICGNSAIAAAAPAIGAKPEDVAASIAFTAV 176 Query: 75 LGVLMVLGLPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGIVSTQIGTLVKLVRV 134 LGV+ VL +P L LL L ATQYGI AGLTVYAVPQVLAAT P G V+ Q GT+VKL+RV Sbjct: 177 LGVVAVLLMPFLPQLLGLDATQYGIFAGLTVYAVPQVLAATAPLGAVAVQTGTIVKLIRV 236 Query: 135 LMLGPIVIGLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGFLVLAALRSFQLVPD 194 LMLGP++ LS++ G S + ++VPWFIIGF+++ RSF L+P+ Sbjct: 237 LMLGPVIATLSVI-----------HGQSGKGRLKLQQMVPWFIIGFVLMIMARSFGLIPE 285 Query: 195 IAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGRV 231 ++PV + ILT++SMAALGL VD+R L GG+V Sbjct: 286 ALLSPVASLSNILTIMSMAALGLSVDIRSLRHAGGKV 322 >lin2251 [S] COG2855 Predicted membrane protein Lin Listeria innocua Length = 335 Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 120/232 (51%), Gaps = 10/232 (4%) Query: 23 YGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEADGDDIASSISFTAILGVLMVLG 82 Y L+++ G+ KLAIL+ACG ICG +A+ A++P ++AD + A + + A+LG + + Sbjct: 111 YFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATIIALLGTIFTVI 170 Query: 83 LPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGIVSTQIGTLVKLVRVLMLGPIVI 142 L+ P+L L YGI AG T++ + V+AA P G + + +VKL RV +L P+ Sbjct: 171 YTLIYPILPLGPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVKLTRVALLVPV-- 228 Query: 143 GLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGFLVLAALRSFQLVPDIAIAPVTK 202 +VA+ AG + VPWFI GFL +A+ SF ++P + Sbjct: 229 --CFVVAKMVNAGTKNRFSWAELP------VPWFIFGFLATSAINSFGIIPTSVTDFLVI 280 Query: 203 TAAILTVVSMAALGLGVDVRVLSTVGGRVTAAVTLSLLLLLGLSIGLVHFFK 254 A L +SM LGL V + +GG+ AA + + L + LV F Sbjct: 281 CAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAALIGSVFLSAFGLALVLLFH 332 >mlr2225 [S] COG2855 Predicted membrane protein Mlo Mesorhizobium loti Length = 325 Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 12/252 (4%) Query: 1 VASGGLLIGAIAVTVVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEA 60 + +GG +G +A T+ + L R++G+ KLA LIA G SICG SAI A V +A Sbjct: 85 IGAGG--VGIVAATLGATFVFTITLGRLIGVDRKLAQLIAAGTSICGASAIVATNIVTDA 142 Query: 61 DGDDIASSISFTAILGVLMVLGLPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGI 120 +D+ +++ + G + +LG PLL P L L +G+ AG +++ V QV+ A G Sbjct: 143 RDEDVTYAVASITLFGTVAMLGFPLLAPALGLDQHAFGLWAGASIHEVAQVIGAGFQNGT 202 Query: 121 VSTQIGTLVKLVRVLMLGPIVIGLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGF 180 S +I T+ KL RV ML P+VI L L+ ARR+ +G + A+ P +PWF+ F Sbjct: 203 QSGEIATVAKLTRVTMLAPMVIALGLM-ARRKTSG------GQQAARPP---MPWFVAAF 252 Query: 181 LVLAALRSFQLVPDIAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGRVTAAVTLSLL 240 + + AL S VP + + I+ + +AA+GL D+ L + G R A + L Sbjct: 253 VAVVALNSLVTVPAEVKSAMALATTIMLTMGLAAMGLQADISQLRSRGLRPLALAFCAFL 312 Query: 241 LLLGLSIGLVHF 252 + S+ LV F Sbjct: 313 FIGCFSLVLVKF 324 >yeiH [S] COG2855 Predicted membrane protein Eco Escherichia coli K12 Length = 349 Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 12/228 (5%) Query: 5 GLLIGAIAVTVVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEADGDD 64 G++I + ++ +LA G ++ GL + LI G+SICG +A+ A PV++A+ Sbjct: 104 GIIIDVLTLSSTFLLACFLG-QKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASK 162 Query: 65 IASSISFTAILGVLMVLGLPLLIPLLK--LTATQYGILAGLTVYAVPQVLAATVPAGIVS 122 + +++ I G + + P + PL+ + +GI G TV+ V QV+AA + Sbjct: 163 VTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDA 222 Query: 123 TQIGTLVKLVRVLMLGPIVIGLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGFLV 182 + K++RV+ML P +I LL AR ++ A G +I PWF I F+V Sbjct: 223 ENAAVISKMLRVMMLAPFLI---LLAARVKQLSGANSGEKSKITI------PWFAILFIV 273 Query: 183 LAALRSFQLVPDIAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGR 230 +A SF L+P + + L ++MAALGL V L G + Sbjct: 274 VAIFNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAK 321