BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0084.p         (170 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

yhiU [M] COG0845 Membrane-fusion protein Eco Escherichia coli K12      96   3e-20
ZyhiU [M] COG0845 Membrane-fusion protein EcZ Escherichia coli O...    95   9e-20
ECs4393 [M] COG0845 Membrane-fusion protein Ecs Escherichia coli...    95   9e-20
SMc02868 [M] COG0845 Membrane-fusion protein Sme Sinorhizobium m...    91   2e-18
AGl3215 [M] COG0845 Membrane-fusion protein Atu Agrobacterium tu...    90   2e-18

>yhiU [M] COG0845 Membrane-fusion protein Eco Escherichia coli K12
          Length = 385

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 2/97 (2%)

Query: 64  LLASCDEPNTATAAVQAPEPDVSVVTVKPQARAMLRELPGRIAPTRVSEVRPRVSGIVVN 123
           +L +CD+ +   AA   PE  V VVT+ P +  +L ELPGR  P  V+E+RP+V GI++ 
Sbjct: 17  MLTACDDKSAENAAAMTPE--VGVVTLSPGSVNVLSELPGRTVPYEVAEIRPQVGGIIIK 74

Query: 124 RMFHQGSEVKVGDPLYQIDPRPFEVELQSTEAALARA 160
           R F +G +V  GD LYQIDP P + EL S + +LA+A
Sbjct: 75  RNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKA 111


>ZyhiU [M] COG0845 Membrane-fusion protein EcZ Escherichia coli O157:H7
           EDL933
          Length = 385

 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 2/97 (2%)

Query: 64  LLASCDEPNTATAAVQAPEPDVSVVTVKPQARAMLRELPGRIAPTRVSEVRPRVSGIVVN 123
           +L +CD+ +    A   PE  V VVT+ P +  +L ELPGR  P  V+E+RP+V GI++ 
Sbjct: 17  MLTACDDKSAENTAAMTPE--VGVVTLSPGSVNVLSELPGRTVPYEVAEIRPQVGGIIIK 74

Query: 124 RMFHQGSEVKVGDPLYQIDPRPFEVELQSTEAALARA 160
           R F +G +V  GD LYQIDP P + EL S + +LA+A
Sbjct: 75  RNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKA 111


>ECs4393 [M] COG0845 Membrane-fusion protein Ecs Escherichia coli O157:H7
          Length = 385

 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 2/97 (2%)

Query: 64  LLASCDEPNTATAAVQAPEPDVSVVTVKPQARAMLRELPGRIAPTRVSEVRPRVSGIVVN 123
           +L +CD+ +    A   PE  V VVT+ P +  +L ELPGR  P  V+E+RP+V GI++ 
Sbjct: 17  MLTACDDKSAENTAAMTPE--VGVVTLSPGSVNVLSELPGRTVPYEVAEIRPQVGGIIIK 74

Query: 124 RMFHQGSEVKVGDPLYQIDPRPFEVELQSTEAALARA 160
           R F +G +V  GD LYQIDP P + EL S + +LA+A
Sbjct: 75  RNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKA 111


>SMc02868 [M] COG0845 Membrane-fusion protein Sme Sinorhizobium meliloti
          Length = 407

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 89  TVKPQARAMLRELPGRIAPTRVSEVRPRVSGIVVNRMFHQGSEVKVGDPLYQIDPRPFEV 148
           T K +   +  ELPGRI  TR++EVRPR+SGIVV R+F QG+ VK GD LY+IDP PF+V
Sbjct: 47  TTKAEPLPITNELPGRITATRIAEVRPRISGIVVERVFEQGTMVKEGDVLYRIDPAPFQV 106

Query: 149 ELQSTEAALARAKA 162
           ++ S EA L RA+A
Sbjct: 107 KVDSAEATLKRAQA 120


>AGl3215 [M] COG0845 Membrane-fusion protein Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 427

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 53/71 (74%)

Query: 85  VSVVTVKPQARAMLRELPGRIAPTRVSEVRPRVSGIVVNRMFHQGSEVKVGDPLYQIDPR 144
           V VV VKP+   +  ELPGRIAPTR++EVRPRVSGI+V R+F QGS VK GD LY+ID  
Sbjct: 60  VKVVAVKPEELPITNELPGRIAPTRLAEVRPRVSGIIVERVFEQGSLVKEGDVLYRIDRA 119

Query: 145 PFEVELQSTEA 155
           PF+V + S E 
Sbjct: 120 PFQVRVDSAEG 130