BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0056.p         (275 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll9114 [S] COG3025 Uncharacterized conserved protein Mlo Mesorh...    88   2e-17
CC3522 Non COG                                                         62   1e-09

>mll9114 [S] COG3025 Uncharacterized conserved protein Mlo Mesorhizobium
           loti
          Length = 500

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 118/275 (42%), Gaps = 16/275 (5%)

Query: 1   MRCETAFRLILSECLEEVATNHEALS-SGDPAALHQTRIALTRLKAAIAFYGPMVADSEW 59
           M   TAF  I + CL +   N   LS S D  ALHQ R++L RL++  +    +  DS +
Sbjct: 226 MSAATAFVRIATACLRQFRLNEMVLSWSRDAEALHQARVSLRRLRSLCSICKSLFDDSRF 285

Query: 60  TRLKSELKWLSAHLGATRDLDVAIENSKGLPEERMLQTARTDAFDALREALQSDRYWQWF 119
             ++ EL WL++  G  R++DV I+ +        LQ AR DA+ A+  +L S R     
Sbjct: 286 DHMREELTWLASEFGDARNIDVMIDRASSEALSSRLQDAREDAYAAVEASLSSARARALM 345

Query: 120 DGMWDWVGSGPWTTRQDPRAAQR---RAVPVSVFHARRLARWHGKLCQKSRGLQGMGKNK 176
               +W+    W   Q          R     VF      +   K+ +    L       
Sbjct: 346 IDAAEWISIRSWRADQADETLHEHSSRGFASGVFD-----KLWKKVAKGGSDLIDADDET 400

Query: 177 RHRVRLASKRLRYAIEFSEGGLPPDEYAS-WRIILKHLRKGQQLLGELNDDEVRRGLLES 235
           RH VR+ +K+LRYA EF +        A   R  ++ +   Q  LG LND     G+L +
Sbjct: 401 RHEVRIVAKKLRYAAEFFQPLYKSKAEAKRHRRFIRAMEDLQDNLGRLNDLATAPGMLAA 460

Query: 236 VDAPAQRAHERKAKHQRVHERKRKSRLLRHAAAVY 270
           ++          A  + +   + KS+LL  AA  +
Sbjct: 461 LELSDM------AGAKDLFSAEDKSKLLEDAAEAH 489


>CC3522 Non COG
          Length = 509

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 105/216 (48%), Gaps = 12/216 (5%)

Query: 30  PAALHQTRIALTRLKAAIAFYGPMVADSEWTRLKSELKWLSAHLGATRDLDVAI----EN 85
           P ++HQ R+A  RL+A +  + P+  D+    L +EL WL+  L A RDLDV +    E 
Sbjct: 256 PDSVHQARVAARRLRAMLKIFKPLSRDAAALALDAELDWLAGELDAARDLDVFVGEVWEG 315

Query: 86  SKGLPE-----ERMLQTARTDAFDALREALQSDRYWQWFDGMWDWVGSGPWTTRQDPRAA 140
           S    E     ER L+ AR  A+  +  AL+S R          W+ +G WT+  DP  A
Sbjct: 316 SAATFEGREAFERGLKAARATAYLRMEAALESPRARDVLLEAAAWLEAGAWTS--DPALA 373

Query: 141 QRRAVPVSVFHARRLARWHGKLCQKSRGLQGMGKNKRHRVRLASKRLRYAIEFSEGGLPP 200
           + R +  + + A RL R   ++ + ++    +  + RHR+RL  K LRYA E     L P
Sbjct: 374 ELRTIAAAAYAADRLDRLRRRMKKGAKHFDALDAHARHRLRLKGKTLRYAAE-DLAPLFP 432

Query: 201 DEYASWRIILKHLRKGQQLLGELNDDEVRRGLLESV 236
           +        L   +  Q  LG LND  +RR L+ S 
Sbjct: 433 NHPRRAERFLAAAKAVQDTLGVLNDRAIRRDLVNSC 468