BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0043.p (310 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC2165 [D] COG1192 ATPases involved in chromosome partitioning C... 182 1e-45 RC0185 [D] COG1192 ATPases involved in chromosome partitioning R... 177 3e-44 RP143 [D] COG1192 ATPases involved in chromosome partitioning Rp... 172 1e-42 AGc4923 [R] COG0488 ATPase components of ABC transporters with d... 74 3e-13 SMc03866 [R] COG0488 ATPase components of ABC transporters with ... 74 6e-13 >CC2165 [D] COG1192 ATPases involved in chromosome partitioning Ccr Caulobacter vibrioides Length = 278 Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/272 (39%), Positives = 160/272 (58%), Gaps = 17/272 (6%) Query: 31 AGERVCLIG--RNGSGKSTIAMHVAVALIKAGQRVATIDLDNKQKSLTHYVENRRDWARE 88 A RV ++G + G+GKSTIA+H+ AL+ G +VA IDLD +Q++ + ENRR W Sbjct: 2 AETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDLRQRTSARFFENRRAWLDN 61 Query: 89 TSLDLGIPAHMCFE----TVSGRSSEVETLGRSALAEIVERLGRSHDFVVIDCPGHDTYL 144 ++L P + ++ R E + G A R DF++ID PG D+ + Sbjct: 62 KKIELPEPLALNLSDNDVALAERPEEEQVAGFEA---AFARAMAECDFILIDTPGGDSAI 118 Query: 145 TTFTHSLANTLITPLNDSFLDFDVLGTVDPNDFKVTGISHYSKMVEEARRERSAHDQ-PA 203 T H A+ ++TP+NDSF+DFD+LGTVDP ++T S YS V E R++R+ Q A Sbjct: 119 TRMAHGRADLVVTPMNDSFVDFDMLGTVDPVTLELTKPSLYSLTVWEGRKQRALSGQRQA 178 Query: 204 FEWVVLRNRLSMLGSRNKRLVGEALSELAKTLNFRMVDGLAERVIFREFYPRGLTAIDDV 263 +WVVLRNRL+ +RN++ + + L+ LAK + FR+ GL +RVI+RE +P GLT D Sbjct: 179 MDWVVLRNRLATTEARNRKRLEDRLNALAKRVGFRIGPGLRDRVIYRELFPFGLTIADLS 238 Query: 264 SQLALGGRP---TMSHVTARLEMERLMTAIML 292 Q+ RP ++ H+ AR E+ LM ++ L Sbjct: 239 PQV----RPVPVSLQHLAARQELRALMHSLGL 266 >RC0185 [D] COG1192 ATPases involved in chromosome partitioning Rco Rickettsia conorii Length = 266 Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/256 (38%), Positives = 155/256 (60%), Gaps = 12/256 (4%) Query: 35 VCLIG--RNGSGKSTIAMHVAVALIKAGQRVATIDLDNKQKSLTHYVENRRDWARET-SL 91 + +IG + G+GK+T +MH+ +AL+ V +ID D++Q SLT+Y++NR + + Sbjct: 9 IFVIGNEKGGAGKTTCSMHLIIALLYQNYSVVSIDTDSRQSSLTNYLKNRDLYNKHNPDK 68 Query: 92 DLGIPAHMCFETVSGRSSEVETLGRSALAEIVERLGRSHDFVVIDCPGHDTYLTTFTHSL 151 + +P H S VE +S E + + + D++VID PG T L+ HS Sbjct: 69 PVLVPKHFHIS-----ESNVEEQAKSF--EPILKNNQDVDYIVIDTPGSHTPLSRVVHSY 121 Query: 152 ANTLITPLNDSFLDFDVLGTVDPNDFKVTGISHYSKMVEEARRERSAHDQPAFEWVVLRN 211 A+T+ITP+NDSFLD DV+ VD D ++ S YS+M+ E + ER++ D+ + +WV+LRN Sbjct: 122 ADTIITPINDSFLDLDVIAKVDSKD-EIISPSIYSQMIWEQKMERASRDRISIDWVILRN 180 Query: 212 RLSMLGSRNKRLVGEALSELAKTLNFRMVDGLAERVIFREFYPRGLTAIDDVSQLALGGR 271 RLS L + NKR VG L++LAK +NF++ +G +ERVI+RE + +GLT + D+ Sbjct: 181 RLSNLDALNKRRVGNVLAKLAKRINFKLAEGFSERVIYRELFLQGLTLL-DLKTAKYDRA 239 Query: 272 PTMSHVTARLEMERLM 287 SHV AR E+ + Sbjct: 240 FNSSHVLARQELRNFL 255 >RP143 [D] COG1192 ATPases involved in chromosome partitioning Rpr Rickettsia prowazekii Length = 264 Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/251 (38%), Positives = 152/251 (60%), Gaps = 12/251 (4%) Query: 40 RNGSGKSTIAMHVAVALIKAGQRVATIDLDNKQKSLTHYVENRRDWARETSLD-LGIPAH 98 + G+GK+T +MH+ + L+ V +ID D++Q SLT+Y++NR + ++ + + +P H Sbjct: 16 KGGAGKTTCSMHLIIGLLYQNYSVISIDADSRQSSLTNYLKNRDLYNQQNPTNTVLVPKH 75 Query: 99 M-CFETVSGRSSEVETLGRSALAEIVERLGRSHDFVVIDCPGHDTYLTTFTHSLANTLIT 157 F+ S+VE S +I++ + D++VID PG T L+ HS A+T+IT Sbjct: 76 FHIFQ------SDVEEQINS-FKQILKN-NKDADYIVIDTPGSYTALSRIAHSYADTIIT 127 Query: 158 PLNDSFLDFDVLGTVDPNDFKVTGISHYSKMVEEARRERSAHDQPAFEWVVLRNRLSMLG 217 P+NDSFLD DV+ VD D ++ S YS+M+ E + ER++ D + +W++LRNRLS L Sbjct: 128 PINDSFLDLDVIAKVDSKD-EIISPSIYSQMIWEQKMERASRDGGSIDWIILRNRLSNLD 186 Query: 218 SRNKRLVGEALSELAKTLNFRMVDGLAERVIFREFYPRGLTAIDDVSQLALGGRPTMSHV 277 + NKR VG L LAK +NF++ +G +ERVI+RE + +GLT + D+ SHV Sbjct: 187 ALNKRRVGAVLVALAKRINFKLAEGFSERVIYRELFLQGLTLL-DLKTAKYDRVFNSSHV 245 Query: 278 TARLEMERLMT 288 AR E+ + Sbjct: 246 LARQELRNFLV 256 >AGc4923 [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 608 Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%) Query: 4 PPLIQLKDISLTFGGTPLLTGVELSVSAGERVCLIGRNGSGKSTIAMHVAVALIKA 59 PP+++L DI LTFG TPLL G L V G+R+CL+GRNGSGKST+ M +A L++A Sbjct: 3 PPILKLDDIKLTFGVTPLLDGANLQVEPGDRICLVGRNGSGKSTL-MKIAAGLVEA 57 >SMc03866 [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains Sme Sinorhizobium meliloti Length = 613 Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%) Query: 4 PPLIQLKDISLTFGGTPLLTGVELSVSAGERVCLIGRNGSGKSTIAMHVAVAL 56 PP+++L DI LTFGGTPLL G L V G+R+CL+GRNGSGKST+ M +A L Sbjct: 3 PPILKLDDILLTFGGTPLLAGAGLQVEPGDRICLVGRNGSGKSTL-MKIAAGL 54