BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0028.p (261 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value lin1061 [P] COG0614 ABC-type Fe3+-hydroxamate transport system, ... 96 8e-20 AF1397m [P] COG0614 ABC-type Fe3+-hydroxamate transport system, ... 93 6e-19 BS_yvrC [P] COG0614 ABC-type Fe3+-hydroxamate transport system, ... 91 2e-18 VNG0316C [P] COG0614 ABC-type Fe3+-hydroxamate transport system,... 90 6e-18 DRB0007 [P] COG0614 ABC-type Fe3+-hydroxamate transport system, ... 88 2e-17 >lin1061 [P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component Lin Listeria innocua Length = 297 Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 17/252 (6%) Query: 6 PRRIVCLTEETVETLYLLGEQDRIVGVSGYAVRPPRVRREKPRVSAFISAEMPKILALDP 65 P +IV L E L+ L D++ GVS Y P ++ + S + E KI+AL P Sbjct: 50 PTKIVSLIPSNTEILFALDLGDKVKGVSAYDDYPKEAQKIEKVTSTTVDTE--KIIALKP 107 Query: 66 DLVLAFSDL---QADIVADLVRAGIAVHVF-NQRDVAGILAMIRSLGAMVGATDRAGQLA 121 DLVL + + D L AGI V V + ++ + I ++G + G +A + Sbjct: 108 DLVLGHESMLATEKDAYQLLKDAGINVFVVPDATNLKEVENSIETIGKLTGKEQKAKDVT 167 Query: 122 QSLAQRLAAVAATPRP-APQPKVYFEEWDDPLISGIG-WVSELIEIAGGTDALPHLRAHK 179 S+ ++ AAV + PKV+ E D +G G +++E++E+AGGT+ + Sbjct: 168 ASMEKQKAAVEKKVKELKTSPKVWIEISPDLYTAGKGTFMNEMLELAGGTNIVTETGFIP 227 Query: 180 AAKDRIVTPDAVRAAMPDVILASWCGKKVVPDRIRKREGWSDIPAVRNDRIVEIKSPIIL 239 ++++V PD+IL+ + K I KR W D+PAV+N++I E+ + + Sbjct: 228 YNEEKVV------ELKPDIILSVYPDAKAT---ILKRAAWKDLPAVKNEQIFEMDANKLS 278 Query: 240 QPGPAALTDGLD 251 +PGP L D Sbjct: 279 RPGPRLLEGAAD 290 >AF1397m [P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component Afu Archaeoglobus fulgidus Length = 311 Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 18/248 (7%) Query: 6 PRRIVCLTEETVETLYLLGEQDRIVGVSGYAVRPPRVRREKPR-----VSAFISAEMPKI 60 P+RIV L E L+ +G DR+VGV+ Y PP V +K + + + + + K+ Sbjct: 53 PQRIVSLAPSNTEILFAIGAGDRVVGVTDYCNYPPEVVEKKKKGELVSIGGYTTINIEKV 112 Query: 61 LALDPDLVLAFSDLQADIVADLVRAGIAVHVFNQRDVAGILAMIRSLGAMVGATDRAGQL 120 ++L PDLV+A + + L R G+ V F+ + V ++ I +G G + A +L Sbjct: 113 VSLKPDLVVATYGNGIENIETLRRMGLTVIAFDPKSVEDVMKDIILIGVATGEKENATKL 172 Query: 121 AQSLAQRLAAVAATPRPAPQPKVYFEEWDDPL-ISGIG-WVSELIEIAGGTDALPHLRAH 178 Q + +R+ V + + P+ +V W DP+ +SG ++ E+I +AGG + Sbjct: 173 VQEMLERIEKVRESMKDKPKVRVAHILWYDPIWVSGKNTFIDEVIRLAGGENVF------ 226 Query: 179 KAAKDRIVTPDAVRAAMPDVILA-----SWCGKKVVPDRIRKREGWSDIPAVRNDRIVEI 233 R V+ + + AA PDVI+ GK VV + + + S I AV+ R+ + Sbjct: 227 NFDGWRTVSVEDLIAANPDVIIVSSGSGMGGGKDVVYEWVVSDDRLSGIKAVKEGRVYVV 286 Query: 234 KSPIILQP 241 + II +P Sbjct: 287 DADIINRP 294 >BS_yvrC [P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component Bsu Bacillus subtilis Length = 314 Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 29/268 (10%) Query: 6 PRRIVCLTEETVETLYLLGEQDRIVGVSGYAVRPPRVRREKPRVSAFISAEMPKILALDP 65 P++IV L E Y LG D++VGV+ P V++ + ++ E K+++L P Sbjct: 57 PKKIVSLMPSNTEITYALGLGDKVVGVTTNDTYPKEVKKVEKVGDMNVNVE--KVISLKP 114 Query: 66 DLVLAFSD---LQADIVADLVRAGIAVHVFNQ-RDVAGILAMIRSLGAMVGATDRAGQLA 121 DLVLA AD + L AGI V N + + + I +G GA +A QL Sbjct: 115 DLVLAHESSMSASADAIKQLKDAGITVLTVNDAQSFSEVYKSIEMIGEAGGAEKKADQLV 174 Query: 122 QSLAQRLAAV---AATPRPAPQPKVYFEEWDDPLISGIG---WVSELIEIAGGTDALPHL 175 +S+ L + A T + V+ E DP I G +++E++ + + Sbjct: 175 KSMKSDLKDIQEKAKTISKDEEKSVFIEVSPDPDIYTTGKDTFMNEMLNV---------I 225 Query: 176 RAHKAAKDRI----VTPDAVRAAMPDVILASWCGKKVVPDRIRKREGWSDIPAVRNDRIV 231 A AA D+ +T +A+ PD I+ + V + KR+GWS+I AV++ R+ Sbjct: 226 HAKNAAADQTGWVQMTDEAIVKLNPDAIVTT---DGVKAKAVEKRDGWSEINAVKHHRVY 282 Query: 232 EIKSPIILQPGPAALTDGLDAIVKALWP 259 ++ ++ + GP L +G++ + ++++P Sbjct: 283 DVDPDLVTRSGP-RLIEGVEELAESIYP 309 >VNG0316C [P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component Hbs Halobacterium sp. NRC-1 Length = 237 Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 10/198 (5%) Query: 8 RIVCLTEETVETLYLLGEQDRIVGVSGYAVRPPRVRREKPRVSAFISAEMPKILALDPDL 67 R+V L + LG DR+VG + + P + P V +++ + +++ LDPD+ Sbjct: 2 RVVSLAPSATAVVTALGASDRLVGTTTHCDAP-----DTPAVGGWLTPDYDRVVDLDPDV 56 Query: 68 VLAFSDLQADIVADLVRAGIAVHVFNQRDVAGILAMIRSLGAMVGATDRAGQLAQSLAQR 127 VL LQA+I L G VH + +LA +G VG D LA +R Sbjct: 57 VLTSDALQAEIRDALRSRGFDVHHTAPATLDDVLASFADIGDAVGRPDAGDALAADCRRR 116 Query: 128 LAAVAATPRPAPQPKVYFEEWDDPLISGIGWVSELIEIAGGTDALPHLRAHKAAKDRIVT 187 LA V PA P VY EEW DP ++ WV + ++ AGG P + A A+ R + Sbjct: 117 LAGV-RDATPADGPTVYCEEWADPPMAAGNWVPDAVDAAGGH--YPFVDA--GARSREID 171 Query: 188 PDAVRAAMPDVILASWCG 205 AVR A PD ++ CG Sbjct: 172 AAAVRVAAPDHVVVHICG 189 >DRB0007 [P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component Dra Deinococcus radiodurans Length = 352 Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 19/260 (7%) Query: 6 PRRIVCLTEETVETLYLLGEQDRIVGVSGYAVRPPRVRREKPRVSAFISAEMPKILALDP 65 PRR+V + ETL LG D++V V Y+ P RV + PRV + ++ I+AL P Sbjct: 103 PRRVVAMLPSHTETLVALGAADKLVAVDTYSNFPRRVVEKLPRVGSAFKPDLEAIVALKP 162 Query: 66 DLVLAFSDLQADIVADLVRAGIAVHVFNQRDVAGILAMIRSLGAMVGATDRAGQLAQSLA 125 DL+LA + + + L G+ V+ + + + +G MV A +L + Sbjct: 163 DLILADESSGSKLTSKLAALGLTVYGGTAQSYNEVFEKMAVIGKMVNRETNATRLITTTR 222 Query: 126 QRLAAVAATPRPAPQPKVYFEEWDDPLISGIG---WVSELIEIAGGTDALPHLRAHKAAK 182 L A+ + R P+ VY+E DP +G ++ LI AGG +P K Sbjct: 223 ADLNALQQSVRQLPKISVYYEV--DPAPYSVGPNSFIGTLIAKAGGQTIIP----AKLGD 276 Query: 183 DRIVTPDAVRAAMPDVILASWCGKKVVPDRIRKREGWSDIPAVRNDRI---VEIKSPIIL 239 + P+ + A P VI+ V PD +KR GW+ + AV+ + + + + Sbjct: 277 FPKIDPELIVKANPQVIIG------VTPDDAKKRGGWTTLNAVKAGWVYKPTDEERDALS 330 Query: 240 QPGPAALTDGLDAIVKALWP 259 +PGP L L A++K + P Sbjct: 331 RPGP-RLPVALRALIKMIHP 349