BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0010.p (266 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc4871 [O] COG0755 ABC-type transport system involved in cytoch... 355 4e-98 SMc03849 [O] COG0755 ABC-type transport system involved in cytoc... 348 6e-96 BMEI1851 [O] COG0755 ABC-type transport system involved in cytoc... 342 4e-94 mlr8327 [O] COG0755 ABC-type transport system involved in cytoch... 311 7e-85 CC3672 [O] COG0755 ABC-type transport system involved in cytochr... 250 3e-66 >AGc4871 [O] COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 253 Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 175/241 (72%), Positives = 205/241 (85%), Gaps = 3/241 (1%) Query: 7 LTDLANPTKFLALTARILPWLAGVTAILLAIGLYQSAMAPDDYQQGATVKIMFIHVPNAW 66 +DLANPT+FLAL ARILPWLAG+TA++LA GLY S DYQQG TV+IM++HVP+AW Sbjct: 11 FSDLANPTRFLALAARILPWLAGLTALVLAAGLYLSFTTDGDYQQGYTVRIMYVHVPSAW 70 Query: 67 LSMFVWGVMSVAALGTLVWRHPLADVAAKAAAPIGAAFTFLALVTGSLWGRPMWGTYWEW 126 L+M + VM+V+A+GTLVWRHPLADV+ KAAAPIGAAFT +AL+TGSLWG+PMWGT+W W Sbjct: 71 LAMMCYSVMAVSAIGTLVWRHPLADVSHKAAAPIGAAFTLIALITGSLWGKPMWGTWWVW 130 Query: 127 DARLTSVLILFLMYLGLIALWRAVEDPSRAARAAAVLTLVGAINIPIIKFSVDWWNTLHQ 186 DARLTSV +LFLMYLGLIAL RA++DPSRAAR +AVL LVG +NIPIIKFSV+WWNTLHQ Sbjct: 131 DARLTSVFVLFLMYLGLIALNRAMDDPSRAARVSAVLILVGFVNIPIIKFSVEWWNTLHQ 190 Query: 187 PASVLRMGGSTLDKAFLWPLLVMAIAFSLLFITLHLAAMRNEILRRRV---RSLQMMQAS 243 PASV+RMGGS +D FLWPLL MAI F+LLF TLH+AAMRNEI RRRV R L A+ Sbjct: 191 PASVIRMGGSAIDAEFLWPLLTMAIGFTLLFFTLHIAAMRNEIWRRRVAAQRRLAARMAN 250 Query: 244 R 244 R Sbjct: 251 R 251 >SMc03849 [O] COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component Sme Sinorhizobium meliloti Length = 256 Score = 348 bits (893), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 171/238 (71%), Positives = 205/238 (86%), Gaps = 1/238 (0%) Query: 7 LTDLANPTKFLALTARILPWLAGVTAILLAIGLYQSAMAPDDYQQGATVKIMFIHVPNAW 66 +DLANPT+FLALT R+LPWLA +T ++ A GL+ S DYQQG TV+IM++HVP+AW Sbjct: 11 FSDLANPTRFLALTDRVLPWLAALTLLVFAAGLWLSFTTEGDYQQGETVRIMYVHVPSAW 70 Query: 67 LSMFVWGVMSVAALGTLVWRHPLADVAAKAAAPIGAAFTFLALVTGSLWGRPMWGTYWEW 126 LSM + VM+++ALGTLVWRHPLADV+A+AAAPIGA FTFLALVTGSLWG+PMWGT+W W Sbjct: 71 LSMMCYTVMAISALGTLVWRHPLADVSARAAAPIGACFTFLALVTGSLWGKPMWGTWWVW 130 Query: 127 DARLTSVLILFLMYLGLIALWRAVEDPSRAARAAAVLTLVGAINIPIIKFSVDWWNTLHQ 186 DARLTSV +LFLMYLGLIAL RA++DPSR+AR +AVL LVG +NIPIIKFSV+WWNTLHQ Sbjct: 131 DARLTSVFVLFLMYLGLIALNRAMDDPSRSARVSAVLILVGFVNIPIIKFSVEWWNTLHQ 190 Query: 187 PASVLRMGGSTLDKAFLWPLLVMAIAFSLLFITLHLAAMRNEILRRRVRSLQMMQASR 244 PASV+R+ G T+D FL PL+VMAIAF+LLF TLH+AAMRNEI RRRV SL+ QA+R Sbjct: 191 PASVIRLDGPTIDPEFLRPLIVMAIAFTLLFFTLHIAAMRNEIWRRRVASLR-RQAAR 247 >BMEI1851 [O] COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component Bme Brucella melitensis Length = 262 Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 164/243 (67%), Positives = 200/243 (82%) Query: 4 TATLTDLANPTKFLALTARILPWLAGVTAILLAIGLYQSAMAPDDYQQGATVKIMFIHVP 63 TA+ DLANPT+FLA R++PWL +AI LA+GLY ++PDDYQQG+TV+IM+IHVP Sbjct: 8 TASWLDLANPTRFLAFAGRVVPWLGLASAIFLAVGLYMVFLSPDDYQQGSTVRIMYIHVP 67 Query: 64 NAWLSMFVWGVMSVAALGTLVWRHPLADVAAKAAAPIGAAFTFLALVTGSLWGRPMWGTY 123 AWLSM + +M+V++LGTLVWRHPLADV+ +AAAPIGA FT LAL TGSLWG+PMWGT+ Sbjct: 68 FAWLSMMCYSIMAVSSLGTLVWRHPLADVSVRAAAPIGAVFTALALATGSLWGKPMWGTW 127 Query: 124 WEWDARLTSVLILFLMYLGLIALWRAVEDPSRAARAAAVLTLVGAINIPIIKFSVDWWNT 183 W WDARLTSV +LFLMYLG+IAL RA++DP+R+A+ AVLTLVG IN+PIIKFSVDWWNT Sbjct: 128 WVWDARLTSVFVLFLMYLGIIALSRAMDDPARSAKPVAVLTLVGFINVPIIKFSVDWWNT 187 Query: 184 LHQPASVLRMGGSTLDKAFLWPLLVMAIAFSLLFITLHLAAMRNEILRRRVRSLQMMQAS 243 LHQPASV R+ G T+D + L PL VMAI F+LLF TLH+ AMRNEI RRRV S++ + A Sbjct: 188 LHQPASVFRLDGPTIDGSMLRPLFVMAIGFTLLFFTLHMMAMRNEIWRRRVASMKKLAAR 247 Query: 244 RVS 246 V Sbjct: 248 NVD 250 >mlr8327 [O] COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component Mlo Mesorhizobium loti Length = 252 Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 154/220 (70%), Positives = 188/220 (85%) Query: 9 DLANPTKFLALTARILPWLAGVTAILLAIGLYQSAMAPDDYQQGATVKIMFIHVPNAWLS 68 DLANPT+F+ L +++PWLA + A++LA+GLY S AP+D+QQG TV+IM+IHVP AWL+ Sbjct: 13 DLANPTRFVGLADKVVPWLATIAALILAVGLYMSFAAPEDFQQGITVRIMYIHVPFAWLA 72 Query: 69 MFVWGVMSVAALGTLVWRHPLADVAAKAAAPIGAAFTFLALVTGSLWGRPMWGTYWEWDA 128 M + +M+V+ALGTLVWRHPLADVA K+AAPIGA FT LAL+TGS+WG+PMWGT+W WDA Sbjct: 73 MMCYSLMAVSALGTLVWRHPLADVALKSAAPIGAVFTALALITGSIWGKPMWGTWWVWDA 132 Query: 129 RLTSVLILFLMYLGLIALWRAVEDPSRAARAAAVLTLVGAINIPIIKFSVDWWNTLHQPA 188 RLTSV +LFLMYLG+IAL RA++D SRAA AAA++TLVG INIPIIKFSVDWWNTLHQPA Sbjct: 133 RLTSVFVLFLMYLGIIALTRALDDASRAAWAAAIITLVGFINIPIIKFSVDWWNTLHQPA 192 Query: 189 SVLRMGGSTLDKAFLWPLLVMAIAFSLLFITLHLAAMRNE 228 SV R+GG T+D + LWPLLVMA+ F+ LF LHL AMR E Sbjct: 193 SVFRLGGPTIDPSLLWPLLVMAVGFTALFFALHLMAMRTE 232 >CC3672 [O] COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component Ccr Caulobacter vibrioides Length = 247 Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 130/244 (53%), Positives = 168/244 (68%), Gaps = 1/244 (0%) Query: 1 MKLTATLTDLANPTKFLALTARILPWLAGVTAILLAIGLYQSAMAPDDYQQGATVKIMFI 60 M T L NP +F+A + PWL G++A IGL + M P+DYQQG TV++MFI Sbjct: 1 MDARHTFDFLTNPERFMAFSRWAAPWLGGLSAAAAVIGLTLTFMVPEDYQQGDTVRMMFI 60 Query: 61 HVPNAWLSMFVWGVMSVAALGTLVWRHPLADVAAKAAAPIGAAFTFLALVTGSLWGRPMW 120 H+P A LSMF++ + +A+L +LV+RH LAD+AA+A APIGA +T LAL+TGSLWGRPMW Sbjct: 61 HIPAASLSMFIYLCLGIASLLSLVYRHVLADLAAQACAPIGAVYTVLALITGSLWGRPMW 120 Query: 121 GTYWEWDARLTSVLILFLMYLGLIALWRAVEDPSRAARAAAVLTLVGAINIPIIKFSVDW 180 GTYW WDARLTSVL+L L YLG +AL A+ED +AAR+AA+L LVG IN+P++KFSVDW Sbjct: 121 GTYWVWDARLTSVLVLLLFYLGYMALRGALEDEQKAARSAAILALVGVINLPVVKFSVDW 180 Query: 181 WNTLHQPASVLRMG-GSTLDKAFLWPLLVMAIAFSLLFITLHLAAMRNEILRRRVRSLQM 239 WNTLHQ +S G L + WP MA+A+ F L L +R + RR+ RSL + Sbjct: 181 WNTLHQGSSTFFADKGDHLPAVYAWPAAFMALAYLGGFGALWLVRIRALVWRRKARSLSL 240 Query: 240 MQAS 243 A Sbjct: 241 KLAE 244