BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0027.p (347 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll1296 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 359 5e-99 CC2633 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 261 2e-69 mlr6799 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 92 2e-18 mll1621 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 73 1e-12 AGc4336 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 70 8e-12 >mll1296 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Mlo Mesorhizobium loti Length = 334 Score = 359 bits (922), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 170/308 (55%), Positives = 220/308 (71%), Gaps = 1/308 (0%) Query: 38 DKVSFGTNWVAEGEHGGFFQALADGTYKKYGLDVTIVPGGPNENNRMLLIAGKLDFFMSA 97 +KV+FGTNW+AE EHGG++QA+ADGTY GLDVTI+ GGP + R +L+AGK+DF+M Sbjct: 26 EKVTFGTNWLAEPEHGGYYQAVADGTYAACGLDVTIMQGGPQVSGRPMLLAGKIDFYMGG 85 Query: 98 NSLQTFDAVTNNVPLVAVAAMFQKDPQVFLTHPEVKATKIEDLKPL-TLLISKEGITSYF 156 N L FDAV +P+ VAA FQKDPQV ++HP K EDLK ++ EG+ ++F Sbjct: 86 NLLSAFDAVQQGIPMRVVAADFQKDPQVLMSHPGEGLDKWEDLKNADQYILGDEGVQTFF 145 Query: 157 QWLKSEYGFDENKVKPYTFNPQPFIVNKQTAMQGYVTSEPFAVEKAAGFKPNVLLLADYG 216 QW+ + GFD K PYT+N PF+ NK++ GYVTSEPFAV+K GF PN LLADYG Sbjct: 146 QWMVTALGFDAAKRAPYTYNTAPFLANKKSIQLGYVTSEPFAVKKEGGFVPNQFLLADYG 205 Query: 217 FNSYSTLIETRRDLVDKKPDFVQRFVDASIVGWYHYVYGDNSAGNAMIKKLNPDMNDELL 276 +++YST IE + +DKKP+ VQ FVD S GWY Y+YGDN A N MIKK NPDM+DE + Sbjct: 206 WDTYSTTIEVMQATIDKKPEVVQCFVDGSAKGWYKYLYGDNKAANDMIKKDNPDMSDEQI 265 Query: 277 AYCVAKMREHGIVDSGDSIKNGIGAMTDERMASFFDKMVRAGVVKSAIDYRQGYTLRFVN 336 A+ + +M++ G+ DSGD+ K GIGAMTD R+ SF+DKMV+A V ID + YTL FVN Sbjct: 266 AFSIEQMKKFGLADSGDTEKLGIGAMTDARIKSFYDKMVKAKVTPEGIDISKAYTLAFVN 325 Query: 337 KAVGAELR 344 K VG +L+ Sbjct: 326 KGVGLDLK 333 >CC2633 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Ccr Caulobacter vibrioides Length = 334 Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 129/319 (40%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 19 LCVAAALAPARAQTSDKTLDKVSFGTNWVAEGEHGGFFQALADGTYKKYGLDVTIVPGGP 78 + + AA +PA+ + + + T+W A+ E GG++QALA G YKK GLDVT++ GGP Sbjct: 15 MAMLAACSPAKKEDAAAGQTPIKLATDWRAQAELGGYYQALATGEYKKRGLDVTLIQGGP 74 Query: 79 NENNRMLLIAGKLDFFMSANSLQTFDAVTNNVPLVAVAAMFQKDPQVFLTHPEVKATKIE 138 N LL G +D + +NS + N P+ AVAA QKDPQV + HP+ I Sbjct: 75 AVNVPQLLATGAVDVGVGSNSFIIMNLAKENAPVKAVAAFMQKDPQVLIAHPDQGINGIA 134 Query: 139 DLKPLTLLISKEGITSYFQWLKSEYGFDENKVKPYTFNPQPFIVNKQTAMQGYVTSEPFA 198 D+K +L+S +T+++ WLK++YGF +++V+ Y ++ PF+ +K+ QGY TSEP+ Sbjct: 135 DMKGRPILLSDASVTAFWVWLKAKYGFTDDQVRKYNYSSAPFLADKRVVQQGYATSEPYL 194 Query: 199 VEKAAGFKPNVLLLADYGFNSYSTLIETRRDLVDKKPDFVQRFVDASIVGWYHYVYGDNS 258 +EK KP V LLAD G+ +Y++ L+ K P VQ FV+A+ GW Y+YGD Sbjct: 195 IEKEGKIKPAVFLLADSGYPAYASFALVPDSLIAKNPAAVQAFVEATAAGWTSYLYGDPK 254 Query: 259 AGNAMIKKLNPDMNDELLAYCVAKMREHGIVDSGDSIKNGIGAMTDERMASFFDKMVRAG 318 G+A I K NP+M ++L KMR +GIV S + + IG MTD R A FF G Sbjct: 255 PGDAAILKDNPEMTQDVLDQAREKMRSYGIV-SANGGRGDIGQMTDARWAEFFKVASEQG 313 Query: 319 VVKSAIDYRQGYTLRFVNK 337 V + +DY++ YTL+F+ K Sbjct: 314 VYPADMDYKKAYTLQFLPK 332 >mlr6799 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Mlo Mesorhizobium loti Length = 336 Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 156/339 (46%), Gaps = 16/339 (4%) Query: 10 LTTSLLTAALCVAAALAPARAQTSDKTLDKVSFGTNWVAEGEHGGFFQALADGTYKKYGL 69 L SL+ AA +AA +A ++ DKV+ +WV G H FF G + K + Sbjct: 2 LRRSLIKAA-TLAACVATLGFSSAALAADKVNVQLDWVVRGNHAMFFVGKEKGFFAKNDI 60 Query: 70 DVTIVPGGPNENNRMLLIAGKLDFFMSANSLQTFDAVTNNVPLVAVAAMFQKDPQVFLTH 129 DV + G + M L+ + F + A + NVP+VA+AA+ Q P ++ Sbjct: 61 DVAEIRKGSGSPDAMRLVGNENADFGFGDLPTLAVARSQNVPVVALAAVNQHSPLGIISL 120 Query: 130 PE-VKATKIEDLKPLTLLISKEGITS-YFQWLKSEYGFDENKVKPYTFNPQPF----IVN 183 + +K K DLK LT+ I G T +F+ + G E + + +P P+ ++ Sbjct: 121 AKTLKLAKPSDLKGLTIGIHPAGSTYIFFKGFLAANGLTEKDMTLNSVSP-PYESYLLLG 179 Query: 184 KQTAMQGYVTSEPFAVEKAAG--FKPNVLLLADYGFNSYSTLIETRRDLVDKKPDFVQRF 241 + + GYV +E +E AG ++++ +D+G+ +Y + + T + ++ KP+ V RF Sbjct: 180 RVQTVVGYVDAEVPELEAKAGGPGSLSIMMGSDHGWKAYGSGLFTSQKMIKDKPEIVARF 239 Query: 242 VDASIVGWYHYVYGDNSAGNAMIKKLNP---DMNDELLAYCVAKMREHGIVDSGDSIKNG 298 V A + YV + K P D D LLA A + S D+ ++G Sbjct: 240 VKAYREA-FDYVVAHPEEAAEITAKAAPGYADKKDVLLAQINADIAS--TFTSPDTKEHG 296 Query: 299 IGAMTDERMASFFDKMVRAGVVKSAIDYRQGYTLRFVNK 337 +G MT + + GV+K+A+ +T +F+ K Sbjct: 297 LGWMTKTQWEETLKTLTDQGVLKAALSADDVFTDKFLAK 335 >mll1621 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Mlo Mesorhizobium loti Length = 323 Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 80/280 (28%), Positives = 119/280 (42%), Gaps = 23/280 (8%) Query: 7 LRALTTSLLTAALCVAAALAPARAQTSDKTLDKVSFGTNWVAEGEHGGFFQALADGTYKK 66 ++ L +L A+ +AA A A DKV+ WV + + G++ A A G Y+ Sbjct: 1 MKKLIIPVLAGAMSLAAFQAMAA--------DKVTLQLKWVTQAQFAGYYVAKAKGFYEA 52 Query: 67 YGLDVTIVPGGPNENNRMLLIAGKLDFFMSANSLQTFDAVTNNVPLVAVAAMFQKDPQVF 126 GLDV I PGGP+ ++ G D + A VPLV +A F+K + Sbjct: 53 EGLDVDIKPGGPDIAPEQVIAGGGADVIVDWMG-GALAAREKGVPLVNIAQPFKK-AGME 110 Query: 127 LTHPEVKATKIE-DLKPLTLLISKEGIT-SYFQW-----LKSEYGFDENKVKPYTFNPQP 179 L P+ K E D K TL + G ++ W LK++ G D V +F+ QP Sbjct: 111 LVCPKDGPIKTEADFKGHTLGVWFFGNEYPFYAWMNKLGLKTDGGKDGVTVLKQSFDVQP 170 Query: 180 FIVNKQTAMQGYVTSEPFAVEKAAGFKPNVLLLADYGFNSYSTLIETRRDLVD--KKPDF 237 I KQ +T + AG+KP L + +Y L + D K P F Sbjct: 171 LI-QKQADCISVMTYNEYWQLIDAGYKPEQLTVFNYSAMGNDLLEDGLYASEDKLKDPAF 229 Query: 238 VQ---RFVDASIVGWYHYVYGDNSAGNAMIKKLNPDMNDE 274 RFV AS+ GW + V ++ A ++ D N + Sbjct: 230 ADKMVRFVRASMKGWKYAVDNNDEAAGIVMDGGGQDENHQ 269 >AGc4336 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 330 Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 20/238 (8%) Query: 38 DKVSFGTNWVAEGEHGGFFQALADGTYKKYGLDVTIVPGGPNENNRMLLIAGKLDFFMS- 96 DK++ WV + + G++ A G Y+ GLDV I PGGP+ +L G D + Sbjct: 25 DKITLQLKWVTQAQFAGYYVAKDKGFYEAEGLDVDIKPGGPDIAPAQVLAGGGADVIVDW 84 Query: 97 -ANSLQTFDAVTNNVPLVAVAAMFQKDPQVFLTHPEVKATKIEDLKPLTLLISKEG---- 151 ++L T + VPLV +A F+ + E TK ED K TL + G Sbjct: 85 MPSALATRE---KGVPLVNIAQPFKSSGMMLTCLKETGITKPEDFKGKTLGVWFFGNEYP 141 Query: 152 ITSYFQWLK--SEYGFDENKVKPYTFNPQPFIVNKQTAMQGYVTSEPFAVEKAAGFKPNV 209 S+ LK + G D V FN P ++ KQ A +T + AG KP Sbjct: 142 FLSWMAHLKIPTTGGADGVTVLKQGFNVDP-LLQKQAACISTMTYNEYWQVIDAGIKPEE 200 Query: 210 LLLADYGFNSYSTLIETRRDLVDK------KPDFVQRFVDASIVGW-YHYVYGDNSAG 260 L+ Y +TL + L DK + D V +FV AS+ GW + + D++AG Sbjct: 201 LVTFKYEAEGVATLEDGLYVLEDKLKDAKFREDLV-KFVRASMKGWKWAEEHPDDAAG 257