BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0025.p (355 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb20661 [G] COG3839 ABC-type sugar transport systems, ATPase co... 491 e-138 mlr8490 [G] COG3839 ABC-type sugar transport systems, ATPase com... 476 e-134 AGl1223 [G] COG3839 ABC-type sugar transport systems, ATPase com... 474 e-133 mlr7004 [G] COG3839 ABC-type sugar transport systems, ATPase com... 471 e-132 AGc4558 [G] COG3839 ABC-type sugar transport systems, ATPase com... 448 e-126 >SMb20661 [G] COG3839 ABC-type sugar transport systems, ATPase components Sme Sinorhizobium meliloti Length = 355 Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust. Identities = 246/353 (69%), Positives = 277/353 (78%) Query: 1 MSSVQIRDVRKSFGNFEVLHGVSIPIEDGEFVVLVGPSGCGKSTLLRMLAGLENITSGTI 60 M+ V DVRKSFG F V+ GV+I IEDGEFV+LVGPSGCGKSTLLRMLAGLENIT+G I Sbjct: 1 MAGVDFVDVRKSFGAFPVIKGVNIEIEDGEFVILVGPSGCGKSTLLRMLAGLENITAGEI 60 Query: 61 SIGDRVVNNVQPKERDIAMVFQNYALYPHMTVADNMGFSLKLRGAKPEEISTGVKRAAEI 120 IG++VVN + PK+RDIAMVFQNYALYPHMTVADNM FSL L EI V AAEI Sbjct: 61 RIGNQVVNRLPPKDRDIAMVFQNYALYPHMTVADNMAFSLMLAARPKSEIDKRVGVAAEI 120 Query: 121 LALTPLLERYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRTEIKELH 180 L L+ LL+RYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMR EIKELH Sbjct: 121 LGLSKLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRAEIKELH 180 Query: 181 QRLKTTTVYVTHDQVEAMTMADKIVVMHDGIVEQMGSPLELYDTPANQFVAGFIGSPAMN 240 QRLKTTTVYVTHDQ+EAMTMADKIVVMHDGIVEQ+G+PLELYD PAN FVAGFIGSPAMN Sbjct: 181 QRLKTTTVYVTHDQIEAMTMADKIVVMHDGIVEQIGAPLELYDNPANLFVAGFIGSPAMN 240 Query: 241 FLKGNVKVNGAAYFEGPNGVKLPLKLAPANSDGKPAVYGVRPEHFTIADDGAEAEIVVVE 300 LKG + + F +G LP+ A + G+ VYG+RPE+ + +G AEI V+E Sbjct: 241 MLKGRLDPADPSVFLTADGTALPVARPAAAAQGRDLVYGLRPEYMALDPNGLPAEIAVIE 300 Query: 301 PTGSETQVFAKLGGEQVVAVFRERHLFNPGDKVRLKPDPSLVHLFDDSTGKRL 353 PTG ETQ+ A+LGG V VFRER PG+ + L D + VHLFD TG+RL Sbjct: 301 PTGYETQLIARLGGHDVTCVFRERVNAKPGETIHLAIDAAHVHLFDAGTGRRL 353 >mlr8490 [G] COG3839 ABC-type sugar transport systems, ATPase components Mlo Mesorhizobium loti Length = 351 Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust. Identities = 241/357 (67%), Positives = 276/357 (77%), Gaps = 10/357 (2%) Query: 1 MSSVQIRDVRKSFGNFEVLHGVSIPIEDGEFVVLVGPSGCGKSTLLRMLAGLENITSGTI 60 M+ V I V K+FG +VLH VS+ I DG+FVVLVGPSGCGKSTLLRM+AGLE ++ GTI Sbjct: 1 MAQVAISKVAKAFGTVKVLHEVSVDIADGQFVVLVGPSGCGKSTLLRMVAGLETVSGGTI 60 Query: 61 SIGDRVVNNVQPKERDIAMVFQNYALYPHMTVADNMGFSLKLRGAKPEEISTGVKRAAEI 120 +IGDRVVN++ P +RDIAMVFQNYALYPH TV NM F+LKLR P ++ VKRAA+I Sbjct: 61 AIGDRVVNHLPPAKRDIAMVFQNYALYPHKTVEQNMAFALKLRKTDPAVVAERVKRAADI 120 Query: 121 LALTPLLERYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRTEIKELH 180 L L P L+RYPRQLSGGQRQRVAMGRAIVR+PQVFLFDEPLSNLDAKLRV MRTEIKELH Sbjct: 121 LDLNPYLKRYPRQLSGGQRQRVAMGRAIVRNPQVFLFDEPLSNLDAKLRVQMRTEIKELH 180 Query: 181 QRLKTTTVYVTHDQVEAMTMADKIVVMHDGIVEQMGSPLELYDTPANQFVAGFIGSPAMN 240 QRLKTTT+YVTHDQ+EAMTMADKIVVM DG +EQ+G+PLEL+D PAN FVAGFIGSP+MN Sbjct: 181 QRLKTTTIYVTHDQIEAMTMADKIVVMRDGRIEQVGAPLELFDRPANLFVAGFIGSPSMN 240 Query: 241 FLKGNVKVNGAAYFEGPNGVKLPLKLAP----ANSDGKPAVYGVRPEHFTIADDGAEAEI 296 LKG V+ GV + L P A DG+ VYGVRPEH I DG A+I Sbjct: 241 LLKGVVRKGDKP------GVDISGTLFPIADNAAQDGQAVVYGVRPEHLEIHPDGVPAKI 294 Query: 297 VVVEPTGSETQVFAKLGGEQVVAVFRERHLFNPGDKVRLKPDPSLVHLFDDSTGKRL 353 VVEPTGSET VF + G ++VA+FRERH F PGD + LKP +HLFD TGKRL Sbjct: 295 SVVEPTGSETLVFLRFGDREMVALFRERHDFKPGDTLTLKPRLDQIHLFDAETGKRL 351 >AGl1223 [G] COG3839 ABC-type sugar transport systems, ATPase components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 347 Score = 474 bits (1219), Expect = e-133, Method: Compositional matrix adjust. Identities = 238/354 (67%), Positives = 277/354 (78%), Gaps = 7/354 (1%) Query: 1 MSSVQIRDVRKSFGNFEVLHGVSIPIEDGEFVVLVGPSGCGKSTLLRMLAGLENITSGTI 60 M+ V ++ V+KS+G +HGV I I DGEFVVLVGPSGCGKSTLLRM+AGLE IT G I Sbjct: 1 MAPVTLKSVKKSYGALATIHGVDIDIADGEFVVLVGPSGCGKSTLLRMIAGLETITGGDI 60 Query: 61 SIGDRVVNNVQPKERDIAMVFQNYALYPHMTVADNMGFSLKLRGAKPEEISTGVKRAAEI 120 SI +RVVN ++PK+RDIAMVFQNYALYPHMTVA NM FSL+ RG E++ V AAEI Sbjct: 61 SISNRVVNEIEPKDRDIAMVFQNYALYPHMTVARNMAFSLEHRGGSKAEVAERVNWAAEI 120 Query: 121 LALTPLLERYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRTEIKELH 180 L LTPLLER+PRQLSGGQRQRVAMGRAIVR+PQVFLFDEPLSNLDAKLRV MR EIK LH Sbjct: 121 LGLTPLLERFPRQLSGGQRQRVAMGRAIVRNPQVFLFDEPLSNLDAKLRVVMRGEIKGLH 180 Query: 181 QRLKTTTVYVTHDQVEAMTMADKIVVMHDGIVEQMGSPLELYDTPANQFVAGFIGSPAMN 240 QRL TTVYVTHDQVEAMTMADKIVVM+ G VEQ G+PLELYD P+N FVAGFIGSPAMN Sbjct: 181 QRLGVTTVYVTHDQVEAMTMADKIVVMNAGRVEQCGAPLELYDRPSNPFVAGFIGSPAMN 240 Query: 241 FLKGNVKVNGAAYFEGPNGVKLPLKLAPANSDGKPAVYGVRPEHFTIADDGAEAEIVVVE 300 F+KG + +G FE +GV LPL + D A+YG+RPEHF +AD G A +++VE Sbjct: 241 FIKGRLTADG---FEA-DGVTLPLPPGHVSGD---AIYGIRPEHFELADHGLPATVLLVE 293 Query: 301 PTGSETQVFAKLGGEQVVAVFRERHLFNPGDKVRLKPDPSLVHLFDDSTGKRLN 354 P GSETQV LG QV+ VFRER PG ++++PD + +HLFD +T +RLN Sbjct: 294 PMGSETQVTMMLGHHQVIGVFRERVQAQPGATIQVQPDLASIHLFDAATSQRLN 347 >mlr7004 [G] COG3839 ABC-type sugar transport systems, ATPase components Mlo Mesorhizobium loti Length = 393 Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust. Identities = 234/354 (66%), Positives = 277/354 (78%), Gaps = 1/354 (0%) Query: 1 MSSVQIRDVRKSFGNFEVLHGVSIPIEDGEFVVLVGPSGCGKSTLLRMLAGLENITSGTI 60 MSSVQI DV+KS+G V+HGVS+ IEDGEFV+LVGPSGCGKSTLLRM+AGLE I+ G I Sbjct: 39 MSSVQIVDVKKSYGATPVIHGVSVDIEDGEFVILVGPSGCGKSTLLRMIAGLETISGGEI 98 Query: 61 SIGDRVVNNVQPKERDIAMVFQNYALYPHMTVADNMGFSLKLRGAKPEEISTGVKRAAEI 120 SIG+RVVN++QPKERDIAMVFQNYALYP MTVA NMGF+L+L GAK EI V AA I Sbjct: 99 SIGERVVNHLQPKERDIAMVFQNYALYPQMTVAQNMGFALELAGAKKAEIKEKVDTAASI 158 Query: 121 LALTPLLERYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRTEIKELH 180 L L PLL RYPRQLSGGQRQRVAMGRAIVRDP+VFLFDEPLSNLDAKLRV MRTEIK LH Sbjct: 159 LGLQPLLARYPRQLSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRVQMRTEIKALH 218 Query: 181 QRLKTTTVYVTHDQVEAMTMADKIVVMHDGIVEQMGSPLELYDTPANQFVAGFIGSPAMN 240 QRLK+T VYVTHDQ+EAMTMADKIVV++ G +EQ+GSPL+LYD P N FVAGF+GSPAMN Sbjct: 219 QRLKSTIVYVTHDQIEAMTMADKIVVLNGGRIEQVGSPLQLYDRPVNMFVAGFLGSPAMN 278 Query: 241 FLKGNVKVNGAAYFEGPNGVKLPLKLAPANSDGKPAVYGVRPEHFTI-ADDGAEAEIVVV 299 F++G V+ + E NG +PL PA + G+ V GVRPE I ++ GA A+++VV Sbjct: 279 FIEGTVRDDPHPGLELDNGSIIPLSAIPAGAAGRRLVLGVRPEDIHIDSETGAAAKVIVV 338 Query: 300 EPTGSETQVFAKLGGEQVVAVFRERHLFNPGDKVRLKPDPSLVHLFDDSTGKRL 353 EPTG+ET + ++ G ++V V RER P + V L S VH FD ++G R+ Sbjct: 339 EPTGAETHLSVEMAGHELVCVLRERVTLKPDETVMLSVRKSAVHFFDPASGSRI 392 >AGc4558 [G] COG3839 ABC-type sugar transport systems, ATPase components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 352 Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust. Identities = 223/358 (62%), Positives = 270/358 (75%), Gaps = 11/358 (3%) Query: 1 MSSVQIRDVRKSFGNFEVLHGVSIPIEDGEFVVLVGPSGCGKSTLLRMLAGLENITSGTI 60 M+ V I++V+K FG+ V+HG+ I I+DGEFVVLVGPSGCGKSTLLRM+AGLE ++ G I Sbjct: 1 MAPVNIQNVQKRFGSVNVIHGIDIDIKDGEFVVLVGPSGCGKSTLLRMIAGLEELSDGEI 60 Query: 61 SIGDRVVNNVQPKERDIAMVFQNYALYPHMTVADNMGFSLKLRGAKPEEISTGVKRAAEI 120 IG R V+++ ++RDIAMVFQNYALYPHMTV DNMGF+LKL+ +E V RAA I Sbjct: 61 HIGPREVSHLPARDRDIAMVFQNYALYPHMTVKDNMGFALKLKKVSADETKAKVDRAAAI 120 Query: 121 LALTPLLERYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRTEIKELH 180 L L LL+RYPRQLSGGQRQRVAMGRA+VRDPQVFLFDEPLSNLDAKLRV MR EIK +H Sbjct: 121 LGLEKLLDRYPRQLSGGQRQRVAMGRALVRDPQVFLFDEPLSNLDAKLRVQMRGEIKAMH 180 Query: 181 QRLKTTTVYVTHDQVEAMTMADKIVVMHDGIVEQMGSPLELYDTPANQFVAGFIGSPAMN 240 QR+ TTT+YVTHDQVEAMTMADKIVV+HDGI+EQ+G+PLELYD PAN FVAGFIGSPAMN Sbjct: 181 QRIGTTTIYVTHDQVEAMTMADKIVVLHDGIIEQIGAPLELYDNPANLFVAGFIGSPAMN 240 Query: 241 FLKGNVKVNGAAYFEGPNGVKLPLKLAPANSD-----GKPAVYGVRPEHFTIADDGAEAE 295 F++G V+ F G+ LPL PA++D G+ VYGVRPEH A+ G E Sbjct: 241 FIRGRVE---EGVFRTIKGLSLPL---PAHADIGKLGGRDLVYGVRPEHIRAAESGIEGR 294 Query: 296 IVVVEPTGSETQVFAKLGGEQVVAVFRERHLFNPGDKVRLKPDPSLVHLFDDSTGKRL 353 + +VE TGSE G+++ +FRER GD + + DP+ VHLFD +GKR+ Sbjct: 295 VELVEGTGSEIYTKLNCKGDEIACLFRERLNVRFGDTIHIAIDPATVHLFDKDSGKRI 352