BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0011.p         (175 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Rv1531 [S] COG2128 Uncharacterized conserved protein Mtu Mycobac...    69   5e-12
MT1582 [S] COG2128 Uncharacterized conserved protein MtC Mycobac...    69   5e-12
MA2469 [S] COG2128 Uncharacterized conserved protein Mac Methano...    60   2e-09

>Rv1531 [S] COG2128 Uncharacterized conserved protein Mtu Mycobacterium
           tuberculosis H37Rv
          Length = 188

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 27  NIFRMMAHSPSYFEQYCRLGGAIRHKGELDPVVRELAITRTGILCEAPYEIVAHKRIGKN 86
           +IF+++ + P     +  L   +   G LD  +REL I R G L +  YE   H R+   
Sbjct: 31  SIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASG 90

Query: 87  VGVTDEQNAALEDWQSATCFNEVQRAALAFTDEIVKLKKPTDATFKTIAAKL--TPAALI 144
           +GV+ +    + DWQ    F   ++A LA TD++V+    +  ++     +L      LI
Sbjct: 91  LGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLI 150

Query: 145 ELQLSVGFYIMTSKFLETFEIDLQ 168
           EL   +  + M +  L + E+ L+
Sbjct: 151 ELVTVISAWRMVASILHSLEVPLE 174


>MT1582 [S] COG2128 Uncharacterized conserved protein MtC Mycobacterium
           tuberculosis CDC1551
          Length = 188

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 27  NIFRMMAHSPSYFEQYCRLGGAIRHKGELDPVVRELAITRTGILCEAPYEIVAHKRIGKN 86
           +IF+++ + P     +  L   +   G LD  +REL I R G L +  YE   H R+   
Sbjct: 31  SIFQVLLNHPRLARTFNDLLATMLWHGTLDSRLRELVIMRIGWLTDCDYEWTQHWRVASG 90

Query: 87  VGVTDEQNAALEDWQSATCFNEVQRAALAFTDEIVKLKKPTDATFKTIAAKL--TPAALI 144
           +GV+ +    + DWQ    F   ++A LA TD++V+    +  ++     +L      LI
Sbjct: 91  LGVSADDLLGVRDWQGYNGFGPAEQAVLAATDDVVREGAVSAQSWSACERELHCDKVVLI 150

Query: 145 ELQLSVGFYIMTSKFLETFEIDLQ 168
           EL   +  + M +  L + E+ L+
Sbjct: 151 ELVTVISAWRMVASILHSLEVPLE 174


>MA2469 [S] COG2128 Uncharacterized conserved protein Mac Methanosarcina
           acetivorans str.C2A
          Length = 308

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 2/144 (1%)

Query: 26  ANIFRMMAHSPSYFEQYCRLGGAIRHKGELDPVVRELAITRTGILCEAPYEIVAHKRIGK 85
           +N+ R +      F  +  LG  +  +G L P  RELAI R  +  E  YE   H     
Sbjct: 30  SNVIRTLVRHEDLFTSWLALGEMLLVRGRLSPRDRELAILRVALRTECEYEWANHSLGAL 89

Query: 86  NVGVTDEQNAALEDWQSATCFNEVQRAALAFTDEIVKLKKPTDATFKTIAAKLTPAALIE 145
             GVT  +  AL     +  +++   A L   DE+      +D T+  +        +IE
Sbjct: 90  GAGVTGTEIDALS--SESASWSDADAALLRAVDELCSDDCVSDDTWTALKTTRDDVQIIE 147

Query: 146 LQLSVGFYIMTSKFLETFEIDLQP 169
           +   VG+Y MT+ FL +  +  +P
Sbjct: 148 ILFVVGYYRMTAGFLNSAGVQPEP 171