BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0015.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1851 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ccr C... 139 9e-33 CC2575 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ccr C... 127 2e-29 FN0271 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Fnu F... 125 8e-29 SMb21633 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme... 125 1e-28 SPy1758 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Spy ... 124 2e-28 >CC1851 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ccr Caulobacter vibrioides Length = 267 Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 133/250 (53%), Gaps = 6/250 (2%) Query: 5 DGAIATITLNRPAAFNAIDMTIAKKLEQLSAEVEANK-DIRVLVIEGEGRAFCAGGDLQT 63 DG +AT+TL P NA +A++L + + A K + R +++ GEGR FC+G +L Sbjct: 12 DG-VATVTLADPTTLNAASPEVARELHHAFSSIAAGKIEARAVILTGEGRGFCSGANLSG 70 Query: 64 IGAATEANNV--APVVGEMLHH-YHAFIETVRRMPKIVLSSVHGSAAGAGMGLAFVTDLC 120 GAA +V P G L Y+ + +R P ++++V+G AAG G +A + DL Sbjct: 71 GGAAGREADVDGKPDAGSALETVYNPLMTLLRDFPLPIVTAVNGPAAGVGCSIALMGDLI 130 Query: 121 IAADDARFTPAYAKIGVSPDGGSTVGIVGTVGTRRALQIFLAEDGFTAQQAYEWGLVVKT 180 +AA+ A F A+ +IG+ PDGGST + +G RA+++ L D A A +WGLV + Sbjct: 131 VAAESAYFLQAFRRIGLVPDGGSTYLLPRLIGKARAMEMMLLGDKIPAATALQWGLVNRC 190 Query: 181 VPAAELKAATRQLAERLAQNPPAAIAGTKSLVYQAATTPTKQQLDAEEHKIITAMHTDDF 240 VP AEL LA LA+ PAA+ + LV+ + + QL AE A T+DF Sbjct: 191 VPDAELMVTAHALALELAKG-PAALGVIRKLVWDSLDSDWTGQLHAERKAQKIAGKTEDF 249 Query: 241 RVAVKKFTSK 250 V F K Sbjct: 250 IEGVTAFLQK 259 >CC2575 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Ccr Caulobacter vibrioides Length = 265 Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/252 (35%), Positives = 132/252 (52%), Gaps = 11/252 (4%) Query: 6 GAIATITLNRPAAFNAIDMTIAKKLEQLSAEVEA---NKDIRVLVIEGEGRAFCAGGDLQ 62 G IA +TLNRP A NA+ +Q++A EA ++DIR +++ G G+AF AGGD++ Sbjct: 10 GHIAILTLNRPDAMNALGAP--GDGDQVAAACEAINDDQDIRCVILTGAGKAFSAGGDVK 67 Query: 63 TIGAATEA--NNVAPVVGEMLHHYHAFIETVRRMPKIVLSSVHGSAAGAGMGLAFVTDLC 120 + A A N V + H + + + +++V+G+A G G +A +TD+ Sbjct: 68 AMKAREGAFGGNGVKVRDGYRKNIHRIVRAIYGLEVPSIAAVNGAAIGLGCDVACMTDIR 127 Query: 121 IAADDARFTPAYAKIGVSPDGGSTVGIVGTVGTRRALQIFLAEDGFTAQQAYEWGLVVKT 180 IAAD ARF + K+G+ P G + T+G RA ++ D A +A EWGL+ K Sbjct: 128 IAADTARFGVTFLKLGLIPGDGGAWLMPRTIGMSRAAELLFTGDVIDAAKAAEWGLISKA 187 Query: 181 VPAAELKAATRQLAERLAQNPPAAIAGTKSLVY--QAATTPTKQQLDAEEHKIITAMHTD 238 VPA +L LAER+AQ PP A+ KSL+ Q A+ T ++ A I A HT+ Sbjct: 188 VPAGDLMGEALALAERIAQQPPHALRMAKSLLKHGQTASYDTLMEMSAAAQAI--AHHTE 245 Query: 239 DFRVAVKKFTSK 250 D V K Sbjct: 246 DHMEGVDAILEK 257 >FN0271 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Fnu Fusobacterium nucleatum Length = 264 Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 14/259 (5%) Query: 1 LLRIDGAIATITLNRPAAFNAIDMTIAKKLEQLSAEVEANKDIRVLVIEGEGRAFCAGGD 60 + ++ IA +T+N NAID +A +L + E + +++V+V++G +AF AGGD Sbjct: 7 IYTVENGIAVVTMNYMKNLNAIDEQMADELMYVVDTAEKDPNVKVMVLKGAEKAFSAGGD 66 Query: 61 L----QTIGAATEANNVAPVVGEMLHHYHAFIETVRRMPKIVLSSVHGSAAGAGMGLAFV 116 + Q I A E N + ++ + +++M KIV++SV G+AAGAG+ LA Sbjct: 67 IGYFYQLIQAGGEVN-----MDGLIGKVGTVADGMKKMSKIVITSVCGAAAGAGVSLALG 121 Query: 117 TDLCIAADDARFTPAYAKIGVSPDGGSTVGIVGTVGTRRALQIFLAEDGFTAQQAYEWGL 176 D I +D+A+F A+ +G+ PD G T + +G R +++ +A++A E G Sbjct: 122 GDFIICSDNAKFILAFVNLGLVPDTGGTYLLSKAIGVPRTMELAATGRPVSAEEAKELGF 181 Query: 177 VVKTVPAAELKAATRQLAERLAQNPPAAIAGTKSLVYQAATTPTKQQLDAEEHKIITAMH 236 V K VP EL T + A+++A P + K +Y A K+ LD E +I T Sbjct: 182 VYKVVPVEELNDFTMKFAQKIAAGPLISYKNIKKQIYDANFADYKKWLD--ETEIPTQRE 239 Query: 237 ---TDDFRVAVKKFTSKSK 252 T DF+ K F K K Sbjct: 240 CAATMDFQEGCKAFMEKRK 258 >SMb21633 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme Sinorhizobium meliloti Length = 263 Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 120/248 (48%), Gaps = 4/248 (1%) Query: 4 IDGAIATITLNRPAAFNAIDMTIAKKLEQLSAEVEANKDIRVLVIEGEGRAFCAGGDLQT 63 ++ + +TLNRP NA + + L ++ D+R +++ G GR F AG DL Sbjct: 11 LEAGVLRLTLNRPDKLNAFNEEMHLALRAGFERARSDDDVRAVMLTGAGRGFSAGQDL-- 68 Query: 64 IGAATEANNVAPVVGEMLH-HYHAFIETVRRMPKIVLSSVHGSAAGAGMGLAFVTDLCIA 122 G AP +G + Y+ + +R + K V+ +V+G AAGAG +AF D+ +A Sbjct: 69 -GDRDPRKGGAPDLGRTIETFYNPLLRLIRSLEKPVVCAVNGVAAGAGANIAFACDITLA 127 Query: 123 ADDARFTPAYAKIGVSPDGGSTVGIVGTVGTRRALQIFLAEDGFTAQQAYEWGLVVKTVP 182 A ARF A+AKIG+ PD G T + VG RA + + + A+ A WGL+ + V Sbjct: 128 ARSARFIQAFAKIGLVPDSGGTWSLPRLVGEARAKALAMTAEPLDAETAASWGLIWRAVD 187 Query: 183 AAELKAATRQLAERLAQNPPAAIAGTKSLVYQAATTPTKQQLDAEEHKIITAMHTDDFRV 242 A L LA RLA P + TK + AAT +QLD E A + D+ Sbjct: 188 DAALMDEASALAVRLAAGPTRGLGLTKRAIQAAATHSFDEQLDLERDLQREAGRSADYAE 247 Query: 243 AVKKFTSK 250 V F K Sbjct: 248 GVTAFLDK 255 >SPy1758 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Spy Streptococcus pyogenes M1 GAS Length = 263 Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 5/247 (2%) Query: 8 IATITLNRPAAFNAIDMTIAKKLEQLSAEVEANKDIRVLVIEGEGRAFCAGGDLQTIGAA 67 +AT+TLNRP N ++ I +++ AEV+ + +R L+I+ G+ F GGDL + A Sbjct: 14 LATLTLNRPEVSNGFNIPICQEILVALAEVKRDTSVRFLLIKAVGKVFSVGGDLVEMQEA 73 Query: 68 TEANNVAPVV--GEMLHHYHAFIETVRRMPKIVLSSVHGSAAGAGMGLAFVTDLCIAADD 125 +NV +V E++ ++ +PK V+ G+ AGA +A D CIA+ Sbjct: 74 VAKDNVQSLVKIAELVQEISF---AIKHLPKPVILCADGAVAGAAFNIALAVDFCIASTQ 130 Query: 126 ARFTPAYAKIGVSPDGGSTVGIVGTVGTRRALQIFLAEDGFTAQQAYEWGLVVKTVPAAE 185 +F A+ +G++PD G + VG RA + + +G TA + ++G V +T + + Sbjct: 131 TKFIQAFVNVGLAPDAGGLFLLTRAVGLNRATHLVMTGEGITADKGLDYGFVYRTAESDK 190 Query: 186 LKAATRQLAERLAQNPPAAIAGTKSLVYQAATTPTKQQLDAEEHKIITAMHTDDFRVAVK 245 L QL +RL + + AG KSLV+Q+ T + AE +DF+ V Sbjct: 191 LDKVCLQLLKRLRRGSSNSYAGMKSLVWQSFFTGWEDYAKAELAIQEELAFKEDFKEGVI 250 Query: 246 KFTSKSK 252 F + + Sbjct: 251 AFGERRR 257