BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0001.p (383 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl3386 [R] COG0673 Predicted dehydrogenases and related protein... 556 e-158 SMc04133 [R] COG0673 Predicted dehydrogenases and related protei... 530 e-150 AGl3148 [R] COG0673 Predicted dehydrogenases and related protein... 74 6e-13 AGl1005 [R] COG0673 Predicted dehydrogenases and related protein... 73 8e-13 SMc02469 [R] COG0673 Predicted dehydrogenases and related protei... 72 2e-12 >AGl3386 [R] COG0673 Predicted dehydrogenases and related proteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 380 Score = 556 bits (1433), Expect = e-158, Method: Compositional matrix adjust. Identities = 264/379 (69%), Positives = 318/379 (83%) Query: 4 KRLGLIMNGVTGRMGLNQHLIRSIVAIREQGGVQLANGDRVMPDPILVGRDAEKVGALAK 63 KR+G+IM+G+TGRMG NQHL+RS++AIR+QGGV L NG+RVM DPILVGR+ K+ +A+ Sbjct: 2 KRIGVIMHGITGRMGYNQHLVRSVLAIRDQGGVLLKNGERVMLDPILVGRNGAKIEEIAR 61 Query: 64 RYNIERHTTDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLEEAV 123 ++N+ R TTD+D ALA+ DT+FFDA TTQ R SLL KAI AGK+VYCEKPI+ +EEA+ Sbjct: 62 KHNVARWTTDIDAALANPDDTLFFDAGTTQMRGSLLEKAIKAGKNVYCEKPISDTMEEAL 121 Query: 124 AVVKLANAKGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVRGEFGYWVFEGGWQEAQ 183 A+ +LA + G+KHG VQDKLFLPGL+KLA LRDSGFFG++LSVRGEFGYWVFEG WQ AQ Sbjct: 122 AIARLAESAGIKHGVVQDKLFLPGLRKLAMLRDSGFFGKILSVRGEFGYWVFEGDWQPAQ 181 Query: 184 RPSWNYRAEDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERYDEKGKKYQATAD 243 RPSWNYR +DGGGIILDM+CHWRYVLDNLFG V+SV+CLG T IPER+DE+GK Y+A AD Sbjct: 182 RPSWNYRLKDGGGIILDMLCHWRYVLDNLFGPVKSVSCLGATHIPERFDEQGKAYKADAD 241 Query: 244 DSAYATFRLKGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVPGLTDCVIQARQATPRP 303 D+AYATF L+GG IAHIN SW RV RDDLVTFQVDGTHGSAV GLT C Q R TP+P Sbjct: 242 DAAYATFELEGGAIAHINSSWAVRVRRDDLVTFQVDGTHGSAVAGLTKCFTQHRTNTPKP 301 Query: 304 VWNPDEKRMHDFYADWQKLPENVVYDNGFKEQWEMFIRHVCEDAPYKYTLLEGAKGVQLA 363 VWNPD+ + DFY WQ++P+N+VYDNGFK QWEMF+RH+ ++ P+ Y L+EG KGVQLA Sbjct: 302 VWNPDQPQTIDFYKTWQEVPDNIVYDNGFKAQWEMFVRHLVDNEPWPYGLMEGVKGVQLA 361 Query: 364 ECALKSWKERRWIDVAPIS 382 E L+SWKERRW+DV IS Sbjct: 362 ELGLRSWKERRWLDVPAIS 380 >SMc04133 [R] COG0673 Predicted dehydrogenases and related proteins Sme Sinorhizobium meliloti Length = 382 Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust. Identities = 248/380 (65%), Positives = 302/380 (79%), Gaps = 1/380 (0%) Query: 5 RLGLIMNGVTGRMGLNQHLIRSIVAIREQGGVQLANGDRVMPDPILVGRDAEKVGALAKR 64 RLG+I++GVTGRMG NQHL+RSI+AIR++GG+ L +G+R+ DPI+VGR+ +K+ LAKR Sbjct: 3 RLGIILHGVTGRMGYNQHLVRSILAIRDRGGITLQSGERLEIDPIIVGRNRDKMEQLAKR 62 Query: 65 YNIERHTTDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLEEAVA 124 ++I R +TDLD ALAD D +FFDA TT R L+ +A++AGKHVYCEKPI+ +L AV Sbjct: 63 HDIARWSTDLDAALADPNDQIFFDAGTTLMRAELIGRALDAGKHVYCEKPISDDLRTAVK 122 Query: 125 VVKLANAKGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVRGEFGYWVFEGGWQ-EAQ 183 + + A A GLKHG VQDKLFLPGL+KLA LRDSGFFG++LSVRGEFGYWVFEG W AQ Sbjct: 123 LARKARASGLKHGVVQDKLFLPGLRKLALLRDSGFFGKILSVRGEFGYWVFEGDWGVPAQ 182 Query: 184 RPSWNYRAEDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERYDEKGKKYQATAD 243 RPSWNYR +DGGGIILDM+CHWRYVLDNLFGEV++V+CLG T IP R DE+G+ Y D Sbjct: 183 RPSWNYRKKDGGGIILDMLCHWRYVLDNLFGEVKAVSCLGATHIPSRIDEQGRAYDCDTD 242 Query: 244 DSAYATFRLKGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVPGLTDCVIQARQATPRP 303 D+AYATF L+GG++AHIN SW RV RDDLVTFQVDGTHGSAV GLT C Q R TP+P Sbjct: 243 DAAYATFELEGGIVAHINSSWAVRVRRDDLVTFQVDGTHGSAVAGLTKCWTQHRVNTPKP 302 Query: 304 VWNPDEKRMHDFYADWQKLPENVVYDNGFKEQWEMFIRHVCEDAPYKYTLLEGAKGVQLA 363 VWNPD+ + DFY W ++P+ +DNGFK QWEMF+RHV ED P+ + L GAKGVQLA Sbjct: 303 VWNPDQPQTIDFYRTWDEVPDTQAFDNGFKAQWEMFLRHVAEDGPWPHGLEAGAKGVQLA 362 Query: 364 ECALKSWKERRWIDVAPISV 383 E LKSW ERRW+DV + + Sbjct: 363 ELGLKSWAERRWLDVPELEL 382 >AGl3148 [R] COG0673 Predicted dehydrogenases and related proteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 415 Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 11/219 (5%) Query: 72 TDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLEEAVAVVKLANA 131 T +D L+D + + +A + +A++AGKH Y EKP+ N E + A A Sbjct: 102 TSVDALLSDPSVEIIVNLTIPKAHVEVGLRALDAGKHAYSEKPLGINFTEGKRLADAAKA 161 Query: 132 KGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVRGEFGYWVFEGGWQEAQRPSWNYRA 191 KGL+ G+ D G + L D G G+ + G F E P+ + Sbjct: 162 KGLRIGSAPDTFLGGGHQTARRLIDEGVLGQPVG-----GTATFMCPGHERWHPNPAFYY 216 Query: 192 EDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERY----DEKGKKYQATADDSAY 247 E GGG +LDM ++ L NLFG V V ER + G+K Sbjct: 217 EVGGGPMLDMGPYYITDLVNLFGPVAKVAGFAIAPRNERLITSEPKNGEKIPVHVATHVS 276 Query: 248 ATFRLKGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAV 286 + G + + MS+ ++ V ++ GT G+ + Sbjct: 277 GVLAFENGAVVQVGMSFDVAGHKH--VPLEIYGTEGTLI 313 >AGl1005 [R] COG0673 Predicted dehydrogenases and related proteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 352 Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 12/157 (7%) Query: 50 LVGRDAEKVGALAKRYNIERHT--TDLDRALADKGDTVFFDAATTQARPSLLTKAINAGK 107 LV + ALA+ + + TDL LA+ + FD QAR +++ ++AG Sbjct: 44 LVDLNENTARALAEEFALTDAVIGTDLRAVLAETKADILFDIVIPQARFAVVEAGLDAGC 103 Query: 108 HVYCEKPIATNLEEAVAVVKLANAKGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVR 167 HV EKP+A ++EEA +V+LA G H VQ++ F+ G+++L + G G + ++ Sbjct: 104 HVLSEKPLAASMEEAATLVELAKKAGKIHAVVQNRRFIAGIRRLRRALEDGVIGDLTAIH 163 Query: 168 GEFGYWVFEGGWQEAQRPSWNYRAEDGGGIILDMVCH 204 +F GG++E + ++LDM H Sbjct: 164 CDFFLGPHFGGFREEMKNV----------LLLDMAIH 190 >SMc02469 [R] COG0673 Predicted dehydrogenases and related proteins Sme Sinorhizobium meliloti Length = 366 Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 17/231 (7%) Query: 62 AKRYNIE-RHTTDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLE 120 A + +E R+ DL LAD + + +A ++ +A+ AGKH Y EKP+AT+ Sbjct: 45 AAEFKVEARNVADL---LADPSIELIVNLTVPKAHVTVAMQALEAGKHTYSEKPLATDFA 101 Query: 121 EAVAVVKLANAKGLKHGTVQDKLFLPGLKKLA-FLRDSGFFGRMLSVRGEFGYWVFEGGW 179 + +V +A KGL+ G D FL G + A + DSG G + G F Sbjct: 102 DGHKLVAMAREKGLRIGAAPDT-FLGGSHQTARAIVDSGVLGTPVG-----GTATFMCPG 155 Query: 180 QEAQRPSWNYRAEDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERY----DEKG 235 E P+ ++ + GGG +LDM ++ L NL G V V T ER G Sbjct: 156 HERWHPNPDFYYDVGGGPMLDMGPYYITDLVNLLGPVSKVAGFATAARKERTITSEARNG 215 Query: 236 KKYQATADDSAYATFRLKGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAV 286 ++ + G + I MS+ +R V ++ GT G+ + Sbjct: 216 ERIPVRVPTHVAGIMAFENGAVVQIGMSFDVAGHRH--VPLELYGTEGTLI 264