BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0032.p (436 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value STM0689 [GEPR] COG0477 Permeases of the major facilitator superf... 529 e-150 RSc3059 [GEPR] COG0477 Permeases of the major facilitator superf... 488 e-137 RSc3060 [GEPR] COG0477 Permeases of the major facilitator superf... 458 e-128 PA5476 [GEPR] COG0477 Permeases of the major facilitator superfa... 433 e-121 PA4343 [GEPR] COG0477 Permeases of the major facilitator superfa... 265 1e-70 >STM0689 [GEPR] COG0477 Permeases of the major facilitator superfamily Sty Salmonella typhimurium LT2 Length = 434 Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust. Identities = 253/406 (62%), Positives = 323/406 (79%) Query: 17 GAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNAFGVFWLGALMRPVGAV 76 GAILR TSGNFLEQFDFFLFGFYA IA+ FFP+E+E A+L+ F VF G LMRPVGA+ Sbjct: 15 GAILRVTSGNFLEQFDFFLFGFYATYIARTFFPAESEFASLMLTFAVFGSGFLMRPVGAI 74 Query: 77 VLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPIIVLIARLLQGFSAGVE 136 VLGAYIDRIGRRKGL+VTL+IM GT++IAL P Y TIG+AAP +VL+ RLLQGFSAGVE Sbjct: 75 VLGAYIDRIGRRKGLMVTLAIMGCGTLLIALVPGYQTIGLAAPALVLLGRLLQGFSAGVE 134 Query: 137 LGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSESMPAATVASWGWRIPF 196 LGGVSVYL+EIATPGN+GFYTS+QSASQQVAI VA+++G+ L+ ++ ++ WGWRIPF Sbjct: 135 LGGVSVYLSEIATPGNKGFYTSWQSASQQVAIVVAALIGYSLNITLGHDAISEWGWRIPF 194 Query: 197 FVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWRIVVLGMMIAVLTTTTF 256 F+GC+IIP+IF LRR+L+ET AFL K P E+FA+ NWRI+ G ++ +TTTTF Sbjct: 195 FIGCMIIPLIFVLRRSLQETEAFLQRKHRPDTREIFATIAKNWRIITAGTLLVAMTTTTF 254 Query: 257 YFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVSDRIGRKPVLLAIAGLS 316 YF+TVYTPT+G+TVL LS +D+L+VT+LV V+NFIW P+GGA+SDRIGR+ VL+ I L+ Sbjct: 255 YFITVYTPTYGRTVLNLSARDSLIVTMLVGVSNFIWLPIGGAISDRIGRRAVLMGITLLA 314 Query: 317 LITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVEIVPAHVRTTCFSLAFA 376 LIT +P + WL P F +M V + FSF+FG+Y+G M+ L E++P +VRT FSLAF+ Sbjct: 315 LITTWPVMQWLTAAPDFTRMTLVLLWFSFFFGMYNGAMVAALTEVMPVYVRTVGFSLAFS 374 Query: 377 LAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALIVY 422 LA +FG TP ST L++ TGDK+SPG+WLMCAA G+ A +++ Sbjct: 375 LATAIFGGLTPAISTALVKLTGDKSSPGWWLMCAALCGLAATAMLF 420 >RSc3059 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 431 Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust. Identities = 238/424 (56%), Positives = 313/424 (73%), Gaps = 1/424 (0%) Query: 13 KSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNAFGVFWLGALMRP 72 +S+ +I R SGNFLE +DF ++G+YA+AIA FFP++NE +L+ + F +G LMRP Sbjct: 8 ESKARSIFRVVSGNFLEMYDFMVYGYYAKAIADTFFPADNEFLSLMLSLVTFGVGFLMRP 67 Query: 73 VGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPIIVLIARLLQGFS 132 +GA++LGAYIDR GRR GLI+TL +MA GT++IAL P YATIG+AAP++VLI RLLQGFS Sbjct: 68 LGALILGAYIDRHGRRAGLILTLGLMACGTLLIALVPGYATIGLAAPLLVLIGRLLQGFS 127 Query: 133 AGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSESMPAATVASWGW 192 AGVELGGVSVYLAEI+TPG +GF+ S+QSASQQVA+ A++LG +LS + + WGW Sbjct: 128 AGVELGGVSVYLAEISTPGRKGFFVSWQSASQQVAVMFAALLGVLLSFQLSPKEMGEWGW 187 Query: 193 RIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWRIVVLGMMIAVLT 252 R+PF VGCLI+P +F +RR+L+ET F K P E+F S NWR+V G ++ V+T Sbjct: 188 RVPFLVGCLIVPFLFLIRRSLQETEEFKQRKHRPALGEIFRSMGENWRLVGAGTLLVVMT 247 Query: 253 TTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVSDRIGRKPVLLAI 312 T +FY +T YTPTFGK+VL LS D+L+VTL V +NF W PV G+VSDRIGR+P+L+ Sbjct: 248 TVSFYLITAYTPTFGKSVLHLSNLDSLIVTLCVGASNFFWLPVMGSVSDRIGRRPLLITF 307 Query: 313 AGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVEIVPAHVRTTCFS 372 L+L+TAYPA+ WL+ PSFG++LAVE+ SF +G Y+G M+ L EI+P VRTT FS Sbjct: 308 TALTLLTAYPAMQWLIAEPSFGRLLAVELWLSFLYGSYNGAMVVTLTEIMPPAVRTTGFS 367 Query: 373 LAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALIVYR-GGQTIEQR 431 LA++LA +FG FTP +TWLI TG+KA PG WL AA G+VA LIV + G+ + Sbjct: 368 LAYSLATAIFGGFTPAIATWLIHATGNKAMPGLWLSFAAICGLVATLIVVKPAGRHVHTT 427 Query: 432 ETVA 435 T A Sbjct: 428 VTTA 431 >RSc3060 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 433 Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust. Identities = 227/411 (55%), Positives = 296/411 (72%) Query: 13 KSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNAFGVFWLGALMRP 72 +S+ AI R SGNFLE FDF ++G+YA AIA FFP+ N +L+ + F G LMRP Sbjct: 8 ESKARAIFRVVSGNFLEMFDFMVYGYYATAIAATFFPAGNAFLSLMLSLMTFGAGFLMRP 67 Query: 73 VGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPIIVLIARLLQGFS 132 +GA+VLGAYIDR GRR GLI+TL +MA GT++IAL P Y TIG+AAP++VLI RLLQGFS Sbjct: 68 LGAIVLGAYIDRHGRRAGLILTLVLMACGTMLIALVPGYGTIGLAAPLLVLIGRLLQGFS 127 Query: 133 AGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSESMPAATVASWGW 192 AG E GGVSVYL+EIATPG +GFY S+QS SQQVA+ A++LG +LS + + WGW Sbjct: 128 AGGEPGGVSVYLSEIATPGRKGFYVSWQSGSQQVAVMFAALLGVLLSFKLSPKEMGEWGW 187 Query: 193 RIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWRIVVLGMMIAVLT 252 R+PF +GCLI+P +FF+RR+L ET F K PT E+ S NWR+ G ++AV+T Sbjct: 188 RVPFLIGCLIVPFLFFIRRSLRETEEFEQRKHRPTMGELLRSMGENWRLAGAGTLLAVMT 247 Query: 253 TTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVSDRIGRKPVLLAI 312 T +FY +T YTPTFG+ VL +S D+L+VTL V +N IW PV G++SDRIGR+ L+ Sbjct: 248 TVSFYLITAYTPTFGRNVLHMSDFDSLIVTLCVGASNLIWLPVMGSLSDRIGRRTPLIVF 307 Query: 313 AGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVEIVPAHVRTTCFS 372 + L+L+TAYPA+ WL+ PSFG++LAVE+ SF +G Y+G M+ L EI+P +RTT FS Sbjct: 308 SALTLLTAYPAMTWLIAEPSFGRLLAVELWLSFLYGGYNGAMIVTLTEIMPPQLRTTGFS 367 Query: 373 LAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALIVYR 423 LA++LA +FG FTP +T LI TG+KA PG WL AA G+VA L V + Sbjct: 368 LAYSLATAIFGGFTPAIATGLIHATGNKAMPGLWLSFAAICGLVATLTVVK 418 >PA5476 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 429 Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust. Identities = 236/425 (55%), Positives = 310/425 (72%), Gaps = 1/425 (0%) Query: 13 KSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNAFGVFWLGALMRP 72 KS+ AI R SGNFLE +DF ++GFYA AIAK FFP +N A+L+ + F G LMRP Sbjct: 5 KSKGVAIFRVVSGNFLEMYDFMVYGFYATAIAKTFFPGDNPFASLMLSLATFGAGFLMRP 64 Query: 73 VGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPIIVLIARLLQGFS 132 +GAV LGAYIDR GRR+GLI+TL +MA+GT++IA P YAT+G+AAP++VL RLLQGFS Sbjct: 65 LGAVFLGAYIDRHGRRQGLIITLGLMAMGTLLIAFVPGYATLGVAAPLLVLFGRLLQGFS 124 Query: 133 AGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSESMPAATVASWGW 192 AGVELGGVSVYL+EIATPG +GF+ S+QSASQQVA+ A +LG +L++ + + WGW Sbjct: 125 AGVELGGVSVYLSEIATPGRKGFFVSWQSASQQVAVVFAGLLGVLLNQWLSPQDMGEWGW 184 Query: 193 RIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWRIVVLGMMIAVLT 252 R+PFF+GCLI+P +F +RR+LEETP F A P+ S+V S N+ +V+ G + V+T Sbjct: 185 RVPFFIGCLIVPALFVIRRSLEETPEFEARTHRPSLSQVLRSIGQNFGVVLAGTAMVVMT 244 Query: 253 TTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVSDRIGRKPVLLAI 312 T +FY +T YTPTFGK L+LS D+LLVT+ + ++NFIW PV GA SDRIGRKP+LL Sbjct: 245 TVSFYLITAYTPTFGKNELQLSDLDSLLVTMCIGLSNFIWLPVMGAFSDRIGRKPLLLGA 304 Query: 313 AGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVEIVPAHVRTTCFS 372 + L+L+TAYPAL WLV PSF +L VE+ SF + Y+G M+ L E++PA VRTT FS Sbjct: 305 SALALLTAYPALSWLVREPSFAGLLGVELWLSFLYSSYNGAMVVALTEVMPADVRTTGFS 364 Query: 373 LAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALIVY-RGGQTIEQR 431 LA++LA FG FTP TWLI ++A+PG WL AA LG++A L+++ R G+ I + Sbjct: 365 LAYSLATATFGGFTPAVCTWLIHTLDNRAAPGIWLSGAALLGLLATLVLFRRRGKEIAEA 424 Query: 432 ETVAA 436 E A Sbjct: 425 ELANA 429 >PA4343 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 439 Score = 265 bits (678), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 152/416 (36%), Positives = 232/416 (55%), Gaps = 1/416 (0%) Query: 10 PQIKSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNAFGVFWLGAL 69 P SR + A GN LE +DF ++GF + IA+ FFPS +E +LL A F +G Sbjct: 5 PSGTSRTRQVAAAVIGNALEWYDFIVYGFLSSLIARLFFPSGDEYTSLLMALATFGVGFF 64 Query: 70 MRPVGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPIIVLIARLLQ 129 MRPVG V+LG Y DR GR+ + + + +M + +IA P+YA IG+ AP++++IAR+LQ Sbjct: 65 MRPVGGVLLGLYADRRGRKAAMQLIILLMTLSIAMIAFAPTYAAIGVGAPLLIVIARMLQ 124 Query: 130 GFSAGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSESMPAATVAS 189 GF+ G E + +L E A P RG Y S+Q Q +A+F + +G +++ + A + S Sbjct: 125 GFATGGEYASATAFLVESAPPHRRGLYGSWQLFGQCLAVFAGAGMGALVTHCLDAEALES 184 Query: 190 WGWRIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWRIVVL-GMMI 248 WGWR+PF G LI PV ++RR + ET AFL + P + + +R VL M + Sbjct: 185 WGWRVPFLFGLLIGPVGLWIRRYMGETEAFLEAIREPGERQGLLGVLREYRRSVLVSMGL 244 Query: 249 AVLTTTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVSDRIGRKPV 308 V+ T +FY V V PTF L L + +V + + P+ G +SDR+GR+PV Sbjct: 245 TVVGTVSFYVVLVNMPTFAHKQLGLPLDEVFMVQMAAVALMTLVIPLAGGLSDRVGRRPV 304 Query: 309 LLAIAGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVEIVPAHVRT 368 LL ++ YP W+ PS G++L ++++ G + G + E P VR+ Sbjct: 305 LLVATLAFMLMVYPLFAWVAAAPSLGRLLLMQLLLCTAIGGFFGPAPTAVAEQFPVRVRS 364 Query: 369 TCFSLAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALIVYRG 424 T ++A+ LA LFG F PF TWL + G +P ++++ AA LG++A L + G Sbjct: 365 TGLAVAYNLAVMLFGGFAPFIVTWLTEVGGSPVAPAFYVLGAAFLGLLATLYLREG 420