BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0022.p         (95 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Rv3175 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su...    60   2e-09
MT3264 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su...    60   2e-09

>Rv3175 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
           related amidases Mtu Mycobacterium tuberculosis H37Rv
          Length = 495

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 2   PTPA-YPHDHEPDQEQRRILIDGEPYIYTDQLAWPGIATLPGLPSTAIPTGFAPDGLPVG 60
           PTPA   H+ + D+  R I +DG    Y DQL W  +A + G P+T +P      GLP+G
Sbjct: 404 PTPAPLHHNKDHDRLGRTIDVDGVSRSYWDQLKWNALANIAGTPATTMPITTTATGLPIG 463

Query: 61  VQIVGPWLEDRTPLKLAELIEREFGGF-VPP 90
           +Q +GP   DRT ++ A L+    GGF VPP
Sbjct: 464 IQAMGPAGGDRTTVEFAALLTEVLGGFRVPP 494


>MT3264 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
           related amidases MtC Mycobacterium tuberculosis CDC1551
          Length = 493

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 2   PTPA-YPHDHEPDQEQRRILIDGEPYIYTDQLAWPGIATLPGLPSTAIPTGFAPDGLPVG 60
           PTPA   H+ + D+  R I +DG    Y DQL W  +A + G P+T +P      GLP+G
Sbjct: 402 PTPAPLHHNKDHDRLGRTIDVDGVSRSYWDQLKWNALANIAGTPATTMPITTTATGLPIG 461

Query: 61  VQIVGPWLEDRTPLKLAELIEREFGGF-VPP 90
           +Q +GP   DRT ++ A L+    GGF VPP
Sbjct: 462 IQAMGPAGGDRTTVEFAALLTEVLGGFRVPP 492