BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0021.p (318 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MT3264 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 138 1e-32 Rv3175 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 138 1e-32 mlr5350 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 125 1e-28 DR1856 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 122 1e-27 MA4523 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 115 9e-26 >MT3264 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases MtC Mycobacterium tuberculosis CDC1551 Length = 493 Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 153/285 (53%), Gaps = 22/285 (7%) Query: 1 MTVKESYNVAGLPTTWGFLPHKDFVATEDALSIQRVKDAGGVILGKTNVPVGLADWQSYN 60 +TVK+SY AG+ TT G D+V T+DA ++ R++ AG +I+GKTN+P G D Q+ N Sbjct: 82 ITVKDSYETAGMRTTCGRRDLADYVPTQDAEAVARLRRAGAIIMGKTNMPTGNQDVQASN 141 Query: 61 EIYGTTNNPYDLGRTPGGSSGGSSAALAAGYGALSLGSDIGGSLRVPAFHCGVYAHKPTF 120 ++G TNNP+D RT GGS+GG +AA AAG + GS+IGGS R+PA +CG+Y HK T+ Sbjct: 142 PVFGRTNNPWDAARTSGGSAGGGAAATAAGLTSFDYGSEIGGSTRIPAHYCGLYGHKSTW 201 Query: 121 ALLPSRGH--TAPPAPPIIYERDLAVTGPMARGAADLSLLFDVMAVPDPLDAGKAYRLDL 178 +P GH +AP P + D+A G RGA D+ + P D G +Y L Sbjct: 202 RSVPLVGHIPSAPGNPGRWGQADMACAGVQVRGARDIIPALEATVGPMRADGGFSYALAP 261 Query: 179 PAARHASLKDFRILVIDTDPVLP---------DKLASHLDKAGAKISRSSPLLP-DFAAS 228 P R +LKDFR+ V DP P D + L AGA + +P D A S Sbjct: 262 P--RAGALKDFRVAVWAEDPHCPIDADVRRAMDDAVAALRAAGAHVVEQPATIPVDMAVS 319 Query: 229 SRLYMRMLLSFLA---ATFPPEVYAGACAAAAALPAGDQPAGRAA 270 ++ ++ A +T P A AAA L A P G AA Sbjct: 320 HNIFQSLVFGAFAVDRSTLSP-----ASAAALGLRAVRHPRGEAA 359 >Rv3175 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Mtu Mycobacterium tuberculosis H37Rv Length = 495 Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 153/285 (53%), Gaps = 22/285 (7%) Query: 1 MTVKESYNVAGLPTTWGFLPHKDFVATEDALSIQRVKDAGGVILGKTNVPVGLADWQSYN 60 +TVK+SY AG+ TT G D+V T+DA ++ R++ AG +I+GKTN+P G D Q+ N Sbjct: 84 ITVKDSYETAGMRTTCGRRDLADYVPTQDAEAVARLRRAGAIIMGKTNMPTGNQDVQASN 143 Query: 61 EIYGTTNNPYDLGRTPGGSSGGSSAALAAGYGALSLGSDIGGSLRVPAFHCGVYAHKPTF 120 ++G TNNP+D RT GGS+GG +AA AAG + GS+IGGS R+PA +CG+Y HK T+ Sbjct: 144 PVFGRTNNPWDAARTSGGSAGGGAAATAAGLTSFDYGSEIGGSTRIPAHYCGLYGHKSTW 203 Query: 121 ALLPSRGH--TAPPAPPIIYERDLAVTGPMARGAADLSLLFDVMAVPDPLDAGKAYRLDL 178 +P GH +AP P + D+A G RGA D+ + P D G +Y L Sbjct: 204 RSVPLVGHIPSAPGNPGRWGQADMACAGVQVRGARDIIPALEATVGPMRADGGFSYALAP 263 Query: 179 PAARHASLKDFRILVIDTDPVLP---------DKLASHLDKAGAKISRSSPLLP-DFAAS 228 P R +LKDFR+ V DP P D + L AGA + +P D A S Sbjct: 264 P--RAGALKDFRVAVWAEDPHCPIDADVRRAMDDAVAALRAAGAHVVEQPATIPVDMAVS 321 Query: 229 SRLYMRMLLSFLA---ATFPPEVYAGACAAAAALPAGDQPAGRAA 270 ++ ++ A +T P A AAA L A P G AA Sbjct: 322 HNIFQSLVFGAFAVDRSTLSP-----ASAAALGLRAVRHPRGEAA 361 >mlr5350 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Mlo Mesorhizobium loti Length = 457 Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/225 (39%), Positives = 130/225 (57%), Gaps = 10/225 (4%) Query: 1 MTVKESYNVAGLPTTWGFLPHKDFVATEDALSIQRVKDAGGVILGKTNVPVGLADWQSYN 60 T+K+ + +G+ TT GF P D+VA+ D+ + R+K AGGV++ KTNV L+DWQS N Sbjct: 76 FTLKDMHETSGMKTTVGFPPFADYVASHDSPVVARLKAAGGVLMAKTNVATMLSDWQSNN 135 Query: 61 EIYGTTNNPYDLGRTPGGSSGGSSAALAAGYGALSLGSDIGGSLRVPAFHCGVYAHKPTF 120 ++G T+NP++L RT GGSSGG++AA+AA +G+D+ S+R+PA CGVY KPT Sbjct: 136 PLFGRTSNPWNLERTAGGSSGGAAAAVAAAMTPFDVGTDMQDSIRLPAAFCGVYGLKPTE 195 Query: 121 ALLPSRGHTAPPAPPIIYERDLAVTGPMARGAADLSLLFDVMAVPDPLDAGKAYRLDLPA 180 + G P R ++ GP+ARG DLSL++ ++A PD D A + + A Sbjct: 196 HRVSLAGAFPNPGDAARSVRLMSCLGPLARGVDDLSLIYQIIAGPDGRDTDLA-PVPVVA 254 Query: 181 ARHASLKDFRILVIDTDPVLP---------DKLASHLDKAGAKIS 216 +LK RI + P P +KLA L AGA ++ Sbjct: 255 MPKLNLKTLRIAFAPSFPGFPVAGDIGVAVEKLARQLQDAGAIVA 299 >DR1856 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Dra Deinococcus radiodurans Length = 482 Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 110/199 (55%), Gaps = 16/199 (8%) Query: 1 MTVKESYNVAGLPTTWGFLPHKDFVATEDALSIQRVKDAGGVILGKTNVPVGLADWQSYN 60 + VK++ NV G TT G ++V+ A + Q+++ AG VI+GK N+ + + Sbjct: 72 IVVKDNINVTGTRTTCGSRMLANYVSPYTATAAQKLQGAGAVIVGKANMDEFAMGSSTES 131 Query: 61 EIYGTTNNPYDLGRTPGGSSGGSSAALAAGYGALSLGSDIGGSLRVPAFHCGVYAHKPTF 120 G T NP+D R PGGSSGGS+ A+AAG +SLGSD GGS+R PA CGVY KPT+ Sbjct: 132 SASGPTLNPWDHERVPGGSSGGSAVAVAAGISPVSLGSDTGGSVRQPAALCGVYGFKPTY 191 Query: 121 ALLPSRGHTAPPAPPIIYERDLAVTGPMARGAADLSLLFDVMAVPDPLDAGKAYRLDLPA 180 + G A Y L GP AR A DL+LL +V+A DP DA LD P Sbjct: 192 GRVSRYGLVA-------YASSLDQIGPFARSAEDLALLMNVIAGHDPRDATS---LDAP- 240 Query: 181 ARHA-----SLKDFRILVI 194 AR A SL+ R+ VI Sbjct: 241 ARFAVGGADSLRGLRVGVI 259 >MA4523 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Mac Methanosarcina acetivorans str.C2A Length = 476 Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 7/170 (4%) Query: 1 MTVKESYNVAGLPTTWGFLPHKDFVATEDALSIQRVKDAGGVILGKTNVPVGLADWQSYN 60 + +K++ +V GLP + G + +V +A I+++ DAG VILGKTN+ + Sbjct: 67 IAIKDNISVVGLPNSCGSKILEGYVPPFNAHVIEKLLDAGAVILGKTNLDEFAMGSSTET 126 Query: 61 EIYGTTNNPYDLGRTPGGSSGGSSAALAAGYGALSLGSDIGGSLRVPAFHCGVYAHKPTF 120 YG T NP+DL R PGGSSGGS+A +AAG +LGSD GGS+R PA CGV KPT+ Sbjct: 127 SYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTY 186 Query: 121 ALLPSRGHTAPPAPPIIYERDLAVTGPMARGAADLSLLFDVMAVPDPLDA 170 + G A Y L GP+A D+++L DV+A D D+ Sbjct: 187 GAVSRYGVVA-------YANSLEQVGPLANNVEDIAILMDVIAGYDRRDS 229