BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0017.p         (301 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI0354 [S] COG1633 Uncharacterized conserved protein Bme Bruce...   290   3e-78
AGc430 [S] COG1633 Uncharacterized conserved protein Atu Agrobac...   283   5e-76
mlr4601 Non COG                                                       281   2e-75
SMc00359 [S] COG1633 Uncharacterized conserved protein Sme Sinor...   268   8e-72

>BMEI0354 [S] COG1633 Uncharacterized conserved protein Bme Brucella
           melitensis
          Length = 271

 Score =  290 bits (742), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 141/230 (61%), Positives = 176/230 (76%), Gaps = 5/230 (2%)

Query: 72  LPLDTIRKEVETMELEAERFYSKAAEKAEDVGVRRLLGDLAEEEKGHEKLAVKLTGEILK 131
           L +D +R+    ME +A RFY +AA++  D   R+LLGDLA++EK HE  A  L   +  
Sbjct: 47  LGIDKVREAASEMEEQAYRFYVEAAKRVSDADTRKLLGDLAQQEKQHEAKAESLEHTLTP 106

Query: 132 PDVRAEEDRTRRRMFVLQYVQPGLAGLMDGSVSTLAPLFAAAFATHHNWQTFLVGLAASI 191
            +V+ EE    R+ F+L Y+QPGLAGLMDGSVSTLAP+FAAAFAT   WQTFLVGL+AS+
Sbjct: 107 DNVQDEERAAERKQFILTYIQPGLAGLMDGSVSTLAPIFAAAFATQDTWQTFLVGLSASV 166

Query: 192 GAGISMGFAEALSDDGSLTGRGSPWLRGLTCGLMTTLGGLGHTIPYLVPDAWPNAFWIAT 251
           GAGISMGF EA+ DDG L+GRGSP  RG++CG+MTTLGGLGH++PYL+ D     FW AT
Sbjct: 167 GAGISMGFTEAVHDDGKLSGRGSPIKRGISCGVMTTLGGLGHSLPYLIKD-----FWSAT 221

Query: 252 AIAGIVVFFELWAIAFIRARYMDTPFLQAVFQIVLGGAIVLAVGILIGAA 301
           +IA I+VFFELWAIAFI+ RYM+TPF +A  Q+V GGA+VLA GILIG+A
Sbjct: 222 SIAVILVFFELWAIAFIQNRYMETPFFRAALQVVFGGALVLAAGILIGSA 271


>AGc430 [S] COG1633 Uncharacterized conserved protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 327

 Score =  283 bits (723), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 145/230 (63%), Positives = 175/230 (76%), Gaps = 5/230 (2%)

Query: 72  LPLDTIRKEVETMELEAERFYSKAAEKAEDVGVRRLLGDLAEEEKGHEKLAVKLTGEILK 131
           L L+ IR + E ME +A RFY +A ++  D   R+LLGDLAE E+GHE +A  L  + L 
Sbjct: 103 LSLEKIRAQAELMEAQAIRFYDEAVKRTTDASTRKLLGDLAEAERGHEDIAQMLEEKHLD 162

Query: 132 PDVRAEEDRTRRRMFVLQYVQPGLAGLMDGSVSTLAPLFAAAFATHHNWQTFLVGLAASI 191
              R EE+ T +R F+L YVQPGLAGLMDGSVSTLAP+FAAAFAT   WQTFL+GL+AS+
Sbjct: 163 EGGRTEEEETAKRQFLLTYVQPGLAGLMDGSVSTLAPIFAAAFATQDTWQTFLIGLSASV 222

Query: 192 GAGISMGFAEALSDDGSLTGRGSPWLRGLTCGLMTTLGGLGHTIPYLVPDAWPNAFWIAT 251
           GAGISMGF EA  DDG L+GRGSP  RGL  G+MT +GGLGH +PYL+P      FW AT
Sbjct: 223 GAGISMGFTEAAHDDGKLSGRGSPLKRGLASGIMTAVGGLGHALPYLIPH-----FWTAT 277

Query: 252 AIAGIVVFFELWAIAFIRARYMDTPFLQAVFQIVLGGAIVLAVGILIGAA 301
           AIA IVVF ELWAIAFI+ R+M+TPFL+AVFQ+VLGG++VLA GI+IG A
Sbjct: 278 AIAAIVVFVELWAIAFIQNRFMETPFLRAVFQVVLGGSLVLAAGIIIGNA 327


>mlr4601 Non COG
          Length = 327

 Score =  281 bits (718), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/230 (63%), Positives = 175/230 (76%), Gaps = 5/230 (2%)

Query: 72  LPLDTIRKEVETMELEAERFYSKAAEKAEDVGVRRLLGDLAEEEKGHEKLAVKLTGEILK 131
           L ++ +R++ E ME +A RFY +AA++  D   R+LL DLA  E+GHE  A +L  + + 
Sbjct: 103 LGIEHVRRQAEAMEQQAYRFYVEAAKRTSDASTRKLLDDLAAAEQGHENSAQRLEQKHVP 162

Query: 132 PDVRAEEDRTRRRMFVLQYVQPGLAGLMDGSVSTLAPLFAAAFATHHNWQTFLVGLAASI 191
            DV+ EE    +R F+L YVQPGLAGLMDGSVSTLAP+FAAAFATH  WQT LVGLAASI
Sbjct: 163 GDVKDEEASAEQRQFILTYVQPGLAGLMDGSVSTLAPIFAAAFATHDTWQTLLVGLAASI 222

Query: 192 GAGISMGFAEALSDDGSLTGRGSPWLRGLTCGLMTTLGGLGHTIPYLVPDAWPNAFWIAT 251
           GAGISMGF E  SDDG L+GRGSP  RGLT G+MTTLGGLGH +PYL+P      FW AT
Sbjct: 223 GAGISMGFTEVASDDGKLSGRGSPIKRGLTVGIMTTLGGLGHALPYLIPH-----FWTAT 277

Query: 252 AIAGIVVFFELWAIAFIRARYMDTPFLQAVFQIVLGGAIVLAVGILIGAA 301
           A+A +VVFFELWAIAF++ RYM TPFL+A FQ+VLGGA+V A G+LIG A
Sbjct: 278 AVAAVVVFFELWAIAFVQNRYMQTPFLRAAFQVVLGGALVFAAGVLIGNA 327


>SMc00359 [S] COG1633 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 327

 Score =  268 bits (686), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 140/213 (65%), Positives = 160/213 (75%), Gaps = 5/213 (2%)

Query: 89  ERFYSKAAEKAEDVGVRRLLGDLAEEEKGHEKLAVKLTGEILKPDVRAEEDRTRRRMFVL 148
            RFY +AA +  D   R+LLGDLA  EK HE LA +L  +    DVR EED T RR F+L
Sbjct: 120 HRFYVEAAARTRDAATRKLLGDLAIAEKSHESLARRLGEKHTPVDVRHEEDETSRRQFIL 179

Query: 149 QYVQPGLAGLMDGSVSTLAPLFAAAFATHHNWQTFLVGLAASIGAGISMGFAEALSDDGS 208
            YVQPGLAGLMDGSVSTLAP+FAAAFAT   WQTFLVGL+AS+GAGISMGF EA  DDG 
Sbjct: 180 TYVQPGLAGLMDGSVSTLAPIFAAAFATQDTWQTFLVGLSASVGAGISMGFTEAAHDDGK 239

Query: 209 LTGRGSPWLRGLTCGLMTTLGGLGHTIPYLVPDAWPNAFWIATAIAGIVVFFELWAIAFI 268
           L+GRGSP  RGL  G+MT LGGLGH +PYL+P      FW AT  A  +VFFELWAIAFI
Sbjct: 240 LSGRGSPVKRGLASGIMTALGGLGHALPYLIPH-----FWTATMTAAAIVFFELWAIAFI 294

Query: 269 RARYMDTPFLQAVFQIVLGGAIVLAVGILIGAA 301
           + RYM+TPFL+A FQ+VLGG +VLA GI+IG A
Sbjct: 295 QNRYMETPFLRAAFQVVLGGGLVLAAGIVIGNA 327