BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0015.p         (99 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr3538 [E] COG2021 Homoserine acetyltransferase Mlo Mesorhizobi...   137   8e-33
CC0525 Non COG                                                        102   2e-22
PA0390 [E] COG2021 Homoserine acetyltransferase Pae Pseudomonas ...    82   3e-16
MA2714_1 [E] COG2021 Homoserine acetyltransferase Mac Methanosar...    75   4e-14
NMA1136 [E] COG2021 Homoserine acetyltransferase NmA Neisseria m...    70   2e-12

>mlr3538 [E] COG2021 Homoserine acetyltransferase Mlo Mesorhizobium loti
          Length = 389

 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 74/93 (79%)

Query: 1   MDYFDIAADHNGVLAKAFTGIQTRFCVVSFTSDWLFPTSESRALVHALNASSARVSFAEI 60
           MDYFD+AADH G LA AF G +TRFC+VSFTSDWLFPT ESR++VHALNA+ A VSF EI
Sbjct: 295 MDYFDLAADHGGRLADAFAGTKTRFCLVSFTSDWLFPTEESRSIVHALNAAGASVSFVEI 354

Query: 61  ETDKGHDAFLLDVPEFLEISRAFLLAAGKARGL 93
           ETD+GHDAFLLD PE       F+ +A +ARGL
Sbjct: 355 ETDRGHDAFLLDEPELFAAINGFIGSAARARGL 387


>CC0525 Non COG
          Length = 382

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/94 (63%), Positives = 71/94 (75%), Gaps = 1/94 (1%)

Query: 1   MDYFDIAADHNGVLAKAFTGIQT-RFCVVSFTSDWLFPTSESRALVHALNASSARVSFAE 59
           MDYFDIAA H GVLAKAFT  +  RFCV+SF+SDWL+PT+E+R LV AL A+ AR +FAE
Sbjct: 288 MDYFDIAASHGGVLAKAFTRARNVRFCVLSFSSDWLYPTAENRHLVRALTAAGARAAFAE 347

Query: 60  IETDKGHDAFLLDVPEFLEISRAFLLAAGKARGL 93
           IE+DKGHDAFLLD P        FL +A + RGL
Sbjct: 348 IESDKGHDAFLLDEPVMDAALEGFLASAERDRGL 381


>PA0390 [E] COG2021 Homoserine acetyltransferase Pae Pseudomonas aeruginosa
          Length = 379

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 54/84 (64%)

Query: 1   MDYFDIAADHNGVLAKAFTGIQTRFCVVSFTSDWLFPTSESRALVHALNASSARVSFAEI 60
           +DYFD AA H   L +   G++  FC++SFT+DW F  + SR +V AL A+   VS+ EI
Sbjct: 291 LDYFDPAAAHGDDLVRTLEGVEADFCLMSFTTDWRFSPARSREIVDALIAAKKNVSYLEI 350

Query: 61  ETDKGHDAFLLDVPEFLEISRAFL 84
           +  +GHDAFL+ +P +L+    ++
Sbjct: 351 DAPQGHDAFLMPIPRYLQAFSGYM 374


>MA2714_1 [E] COG2021 Homoserine acetyltransferase Mac Methanosarcina
           acetivorans str.C2A
          Length = 419

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 2/84 (2%)

Query: 1   MDYFDIAADHNGVLAKAFTGIQTRFCVVSFTSDWLFPTSESRALVHALNASSARVSFAEI 60
           +DYFD+A   NG L + F+G+  ++ V+S +SDWL+P  +S+ +V AL A+     + EI
Sbjct: 335 VDYFDLAK--NGSLIEGFSGVTAKYLVISISSDWLYPPYQSQEIVSALTANGVDARYEEI 392

Query: 61  ETDKGHDAFLLDVPEFLEISRAFL 84
            +  GHDAFLL+  +   + R+FL
Sbjct: 393 RSQHGHDAFLLEEGQLSYLLRSFL 416


>NMA1136 [E] COG2021 Homoserine acetyltransferase NmA Neisseria meningitidis
           Z2491
          Length = 379

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 49/84 (58%)

Query: 1   MDYFDIAADHNGVLAKAFTGIQTRFCVVSFTSDWLFPTSESRALVHALNASSARVSFAEI 60
           +DYFD AAD    L +A   +Q +F V SF++DW F    S  LV AL A+   V + E+
Sbjct: 287 LDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKALIAAQKSVQYIEV 346

Query: 61  ETDKGHDAFLLDVPEFLEISRAFL 84
           ++  GHDAFL++   ++    A++
Sbjct: 347 KSAHGHDAFLMEDEAYMRAVAAYM 370