BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0009.p         (87 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cgl2728 [K] COG1396 Predicted transcriptional regulators Cgl Cor...    86   3e-17
mll1444 [K] COG1396 Predicted transcriptional regulators Mlo Mes...    70   2e-12

>Cgl2728 [K] COG1396 Predicted transcriptional regulators Cgl
           Corynebacterium glutamicum
          Length = 189

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 52/81 (64%)

Query: 7   NPLELVEIELPARQEAGFPASAYHLVRQVVWVISGRLTLMEGAERHELAAGDRVELGPPS 66
           +PLELVE+ LP   E G+PA AY  + QVVWV+ G + + EG E HEL+ GD +  GPP 
Sbjct: 105 SPLELVEVMLPPGAEVGYPADAYRFMDQVVWVLEGAVRITEGEEVHELSTGDCLRFGPPR 164

Query: 67  DIVFRNETAQPCRYLVAIVRR 87
           D  F N T    RYLVA+ +R
Sbjct: 165 DTDFANPTTVATRYLVALDKR 185


>mll1444 [K] COG1396 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 187

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 3   LHPAN--PLELVEIELPARQEAGFPASAYHLVRQVVWVISGRLTLMEGAERHELAAGDRV 60
           L PA+  PLELV++ LPA      PA++Y  ++Q +W+I+GRL   EG   H L  GD +
Sbjct: 102 LSPASDMPLELVKVHLPAGARVSLPAASYAFIKQQIWLIAGRLEFTEGDVVHRLEPGDCL 161

Query: 61  ELGPPSDIVFRNETAQPCRYLVAIVR 86
            LG PSD  F    A    YLVA+VR
Sbjct: 162 ALGAPSDCTFHALEAG-ADYLVALVR 186