BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0007.p (537 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc02433 [O] COG0542 ATPases with chaperone activity, ATP-bindin... 678 0.0 AGl1346 [O] COG0542 ATPases with chaperone activity, ATP-binding... 669 0.0 CC0878 [O] COG0542 ATPases with chaperone activity, ATP-binding ... 626 e-179 BMEI0195 [O] COG0542 ATPases with chaperone activity, ATP-bindin... 616 e-176 mll3429 [O] COG0542 ATPases with chaperone activity, ATP-binding... 600 e-171 >SMc02433 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Sme Sinorhizobium meliloti Length = 868 Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/588 (63%), Positives = 432/588 (73%), Gaps = 66/588 (11%) Query: 3 DGHQQFSPLHLLKVLLDDNEGLAGGLIDRAGGNSRAILKATEEALNKLPKVSGNGAGQVY 62 +GHQQF+P H+LKVLLDD++G+A LI+RAGGN+R T AL KLPKV+G G G VY Sbjct: 24 EGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAKVGTAAALAKLPKVTG-GNGSVY 82 Query: 63 LSPELARAFDAAEKAADKAGDSFVTVERLLLGLTLEKGSEAASILSKG------------ 110 LS LA+ F AAE AA KAGDSFVTVERLLL L +E + ASILSK Sbjct: 83 LSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAATASILSKAGVTPTKLNQVIN 142 Query: 111 ----GVTAQNLNA--AIEALRK------------------GR------------------ 128 G TA + NA ++L+K GR Sbjct: 143 EIRKGRTADSANAEQGFDSLKKYARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNN 202 Query: 129 --------TADSATAEN-AYDALXGDVPESLKDKKLLSLDMGALIAGAKYRGEFEERLKS 179 +A AE A + GDVPESLKDK+L++LDMGALIAGAK+RGEFEERLK+ Sbjct: 203 PVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMALDMGALIAGAKFRGEFEERLKA 262 Query: 180 VLQEVSTAEGGIILFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRK 239 VL EV + G IILFIDEMHTL+GAGKADGAMDASNLLKPALARGELHC+GATTLDEYRK Sbjct: 263 VLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRK 322 Query: 240 HVEKDAALARRFQPIYVSEPTVEDTISILRGLKDKYEQHHGVRITDSALVAATTLSNRYI 299 HVEKDAALARRFQP+ V EPTVEDTISILRGLK+KYEQHH VRI+DSALVAA LSNRYI Sbjct: 323 HVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRISDSALVAAAALSNRYI 382 Query: 300 TDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRDIIRLKIEQEALKKENDAGSKSRL 359 TDRFLPDKAIDLMDEAA+RL+MQVDSKPEELD LDR +I+LKIE+EALKKE D SK RL Sbjct: 383 TDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRVIQLKIEREALKKETDVSSKDRL 442 Query: 360 QTLEKELAGLEERSTALTARWSAEKNKLSNAQKLKSELDALRVELANAQRKGEFQKAGEL 419 LE +L+ LEE + ALTARW AEK KL A LK +LD R EL AQRKGEFQ+AGEL Sbjct: 443 AKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQLDEARNELQIAQRKGEFQRAGEL 502 Query: 420 AYGRIPELERKLADIEAQENSKPNGGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKDK 479 AYG IP LE++LA+ E+Q+ + N M++E VT ++IA +VSRWTG+PVDKMLEGE+DK Sbjct: 503 AYGVIPNLEKELAEAESQDGASAN--PMVQEVVTPDNIAHIVSRWTGIPVDKMLEGERDK 560 Query: 480 LLKMEDSLARRVVGQAEAVRAVATAVRRARAGLQDPNRPTGSFMFLLP 527 LL+MED LA+ VVGQ +AV+AV+ AVRR+RAGLQDPNRP GSF+FL P Sbjct: 561 LLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGP 608 >AGl1346 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 887 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/588 (61%), Positives = 423/588 (71%), Gaps = 66/588 (11%) Query: 3 DGHQQFSPLHLLKVLLDDNEGLAGGLIDRAGGNSRAILKATEEALNKLPKVSGNGAGQVY 62 + HQQFSP H+LKVLLDD +G+A LI+RAGG+++ A + AL KLPKVSG G G + Sbjct: 37 ENHQQFSPEHVLKVLLDDEQGMAASLIERAGGDAKEARLANDAALAKLPKVSG-GNGGLS 95 Query: 63 LSPELARAFDAAEKAADKAGDSFVTVERLLLGLTLEKGSEAASILSKGGV---------- 112 L+ LA+ F AE A KAGDSFVTVERLL L +E + ++ L K G Sbjct: 96 LTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIESSASTSASLKKAGATAQALNQVIN 155 Query: 113 ------TAQNLNA--AIEALRK------------------GR------------------ 128 TA + NA +AL+K GR Sbjct: 156 DIRKGRTADSANAEQGFDALKKYARDLTEEAREGRLDPVIGRDDEIRRTIQVLSRRTKNN 215 Query: 129 --------TADSATAEN-AYDALXGDVPESLKDKKLLSLDMGALIAGAKYRGEFEERLKS 179 +A AE A + GDVPESLKDKKL++LDMGALIAGAKYRGEFEERLK+ Sbjct: 216 PVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKA 275 Query: 180 VLQEVSTAEGGIILFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRK 239 VL EV GGIILFIDEMHTL+GAGKADGAMDASNLLKPALARGELHC+GATTLDEYRK Sbjct: 276 VLNEVQAENGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRK 335 Query: 240 HVEKDAALARRFQPIYVSEPTVEDTISILRGLKDKYEQHHGVRITDSALVAATTLSNRYI 299 HVEKD ALARRFQP+ V EP VEDTISILRGLK+KYEQHH VRI+DSALVAA TLSNRYI Sbjct: 336 HVEKDPALARRFQPVLVDEPNVEDTISILRGLKEKYEQHHKVRISDSALVAAATLSNRYI 395 Query: 300 TDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRDIIRLKIEQEALKKENDAGSKSRL 359 TDRFLPDKAIDLMDEAA+RL+MQVDSKPEELD LDR II+LKIE+EALK+E D S RL Sbjct: 396 TDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRIIQLKIEREALKQETDQSSVDRL 455 Query: 360 QTLEKELAGLEERSTALTARWSAEKNKLSNAQKLKSELDALRVELANAQRKGEFQKAGEL 419 + LE ELA EE++ ALTARW AEK KL +A LK LD R ELA AQR G+FQ+AGEL Sbjct: 456 RKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGEL 515 Query: 420 AYGRIPELERKLADIEAQENSKPNGGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKDK 479 YG IP LE++LA EA+++S G M++E VT ++IA VVSRWTG+PVDKMLEG+++K Sbjct: 516 TYGIIPGLEKELAAAEARDSS--GAGSMVQEVVTPDNIAHVVSRWTGIPVDKMLEGQREK 573 Query: 480 LLKMEDSLARRVVGQAEAVRAVATAVRRARAGLQDPNRPTGSFMFLLP 527 LL+MED LA+ VVGQ EAV+AV+ AVRR+RAGLQDPNRP GSF+FL P Sbjct: 574 LLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGP 621 >CC0878 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Ccr Caulobacter vibrioides Length = 859 Score = 626 bits (1615), Expect = e-179, Method: Compositional matrix adjust. Identities = 343/587 (58%), Positives = 411/587 (70%), Gaps = 70/587 (11%) Query: 4 GHQQFSPLHLLKVLLDDNEGLAGGLIDRAGGNSRAILKATEEALNKLPKVSGNGAGQVYL 63 GHQQF+P H+LKVLL++ +GL+ LI AGG + E L K P+V G G GQ+Y+ Sbjct: 25 GHQQFAPEHILKVLLEEKDGLSRALIQSAGGRPDQLDGGVETLLAKTPRVDGAG-GQLYM 83 Query: 64 SPELARAFDAAEKAADKAGDSFVTVERLLLGLTLEKGSEAASILSKG------------- 110 P+ AR F AEK+A AGD+FVT ERLL+ + E G EAA + + Sbjct: 84 KPDTARVFAEAEKSAKAAGDAFVTTERLLIAIAKE-GGEAAKLFKEAGVSAQSLETAANA 142 Query: 111 ---GVTAQNLNA--AIEALRK------------------GR------------------- 128 G TA + NA EAL++ GR Sbjct: 143 MRKGRTADSANAEEGYEALKRYARDLTAAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNP 202 Query: 129 -------TADSATAEN-AYDALXGDVPESLKDKKLLSLDMGALIAGAKYRGEFEERLKSV 180 +A E A + GDVPESLKDKKLLSLDMG+LIAGAKYRGEFEERLK+V Sbjct: 203 VLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLLSLDMGSLIAGAKYRGEFEERLKAV 262 Query: 181 LQEVSTAEGGIILFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRKH 240 L EV+ AEG IILFIDEMHTL+GAGK DGAMDASNLLKPALARGELHC+GATTLDEYRKH Sbjct: 263 LGEVTAAEGSIILFIDEMHTLVGAGKGDGAMDASNLLKPALARGELHCVGATTLDEYRKH 322 Query: 241 VEKDAALARRFQPIYVSEPTVEDTISILRGLKDKYEQHHGVRITDSALVAATTLSNRYIT 300 VEKDAALARRFQP++VSEPTVEDT+SILRGLK+KYE HHGVRI+DSA+VAA TLSNRYI Sbjct: 323 VEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYEVHHGVRISDSAIVAAATLSNRYIA 382 Query: 301 DRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRDIIRLKIEQEALKKENDAGSKSRLQ 360 DRFLPDKAIDL+DEA++R++MQ+DSKPEELD +DR +++LKIE+EAL KE DA SK RL+ Sbjct: 383 DRFLPDKAIDLVDEASSRVRMQIDSKPEELDEIDRRLVQLKIEREALSKETDAASKQRLE 442 Query: 361 TLEKELAGLEERSTALTARWSAEKNKLSNAQKLKSELDALRVELANAQRKGEFQKAGELA 420 LE E+ L+ RS +TARW AEK K+ A + + LD LR +LANAQR G+F +AG++ Sbjct: 443 NLEVEIDDLQFRSDEMTARWKAEKEKVGGAAQAREALDRLRADLANAQRAGDFARAGQIQ 502 Query: 421 YGRIPELERKLADIEAQENSKPNGGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKDKL 480 YG IP LER+LA+ EA + + E V A IA VVSRWTGVPV+KMLEGE++KL Sbjct: 503 YGEIPALERRLAEAEAGDTQA-----LTPEVVDAEQIAAVVSRWTGVPVEKMLEGEREKL 557 Query: 481 LKMEDSLARRVVGQAEAVRAVATAVRRARAGLQDPNRPTGSFMFLLP 527 LKMED L RVVGQ EA+ AV+ AVRRARAGLQDP++P GSF+FL P Sbjct: 558 LKMEDELRGRVVGQDEALEAVSDAVRRARAGLQDPSKPIGSFLFLGP 604 >BMEI0195 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Bme Brucella melitensis Length = 931 Score = 616 bits (1589), Expect = e-176, Method: Compositional matrix adjust. Identities = 334/586 (56%), Positives = 407/586 (69%), Gaps = 66/586 (11%) Query: 4 GHQQFSPLHLLKVLLDDNEGLAGGLIDRA----------------------GGNSRAILK 41 G+QQF+P H+LKVL+DD+EGLA L++RA GGN + L Sbjct: 82 GNQQFTPEHILKVLIDDDEGLAASLVERAGGRVGDVRMGLQSALEKLPKVSGGNDQLYLS 141 Query: 42 ATEEALNKLPKVSGNGAGQVYLSPELARAFDAAEKAADK------AGDSFVTVERLLLGL 95 + L + + AG +++ E A EK+A AG + + R++ + Sbjct: 142 QPLAKVFSLAEELASKAGDSFVTVERLLTALAMEKSAKTSEILSAAGVTPTALNRVINDM 201 Query: 96 TLEKGSEAASILSKGGVTAQNLNAAIEALRKGR--------------------------- 128 + +++AS S + E R G+ Sbjct: 202 RKGRTADSASAESNYDALKKYARDLTEDARAGKLDPVIGRDEEIRRTIQVLSRRTKNNPV 261 Query: 129 ------TADSATAEN-AYDALXGDVPESLKDKKLLSLDMGALIAGAKYRGEFEERLKSVL 181 +A AE A + GDVPESLKDK+L++LDMGALIAGAKYRGEFEERLK+VL Sbjct: 262 LIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVL 321 Query: 182 QEVSTAEGGIILFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRKHV 241 EV TA G IILFIDEMHTL+GAGK DGAMDASNLLKPALARGELHC+GATTL+EYRK+V Sbjct: 322 SEVQTAAGQIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCVGATTLEEYRKYV 381 Query: 242 EKDAALARRFQPIYVSEPTVEDTISILRGLKDKYEQHHGVRITDSALVAATTLSNRYITD 301 EKDAALARRFQP++V EPTVEDTISILRGLK+KYEQHH VR++DSALVAA LSNRYITD Sbjct: 382 EKDAALARRFQPVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAAMLSNRYITD 441 Query: 302 RFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRDIIRLKIEQEALKKENDAGSKSRLQT 361 RFLPDKAIDL+DEAA+RL+MQVDSKPEELD +DR I++LKIE+EALK E DA SK RLQ Sbjct: 442 RFLPDKAIDLVDEAASRLRMQVDSKPEELDEIDRRIMQLKIEREALKVETDAASKDRLQR 501 Query: 362 LEKELAGLEERSTALTARWSAEKNKLSNAQKLKSELDALRVELANAQRKGEFQKAGELAY 421 +EKEL+ LEE S LTA+W AEK KL A LK +L+ R LA AQR GEFQKAGELAY Sbjct: 502 IEKELSDLEEESAELTAKWQAEKQKLGLAADLKRQLEEARNALAIAQRNGEFQKAGELAY 561 Query: 422 GRIPELERKLADIEAQENSKPNGGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKDKLL 481 G IP+LE++LAD E+QEN G ++EE VT +H+AQV+SRWTG+PVD+MLEGE++KLL Sbjct: 562 GTIPQLEKQLADAESQENK----GSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLL 617 Query: 482 KMEDSLARRVVGQAEAVRAVATAVRRARAGLQDPNRPTGSFMFLLP 527 +MED + +RVVGQ EAV+A++ AVRRARAGLQDPNRP GSF+FL P Sbjct: 618 RMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGP 663 >mll3429 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Mlo Mesorhizobium loti Length = 868 Score = 600 bits (1548), Expect = e-171, Method: Compositional matrix adjust. Identities = 296/397 (74%), Positives = 339/397 (85%), Gaps = 5/397 (1%) Query: 132 SATAEN-AYDALXGDVPESLKDKKLLSLDMGALIAGAKYRGEFEERLKSVLQEVSTAEGG 190 +A AE A + GDVPESLKDK+L++LDMGALIAGAKYRGEFEERLK+VL EV++A G Sbjct: 214 TAIAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSEVTSANGN 273 Query: 191 IILFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARR 250 IILFIDEMHTL+GAGKADGAMDASNLLKPALARGELHC+GATTLDEYRKHVEKD ALARR Sbjct: 274 IILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARR 333 Query: 251 FQPIYVSEPTVEDTISILRGLKDKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAID 310 FQP++V EPTVEDT+SILRGLK+KYEQHH VRI+DSALVAA TLSNRYI DRFLPDKAID Sbjct: 334 FQPVFVDEPTVEDTVSILRGLKEKYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAID 393 Query: 311 LMDEAAARLKMQVDSKPEELDSLDRDIIRLKIEQEALKKENDAGSKSRLQTLEKELAGLE 370 L+DEAA+RL+MQVDSKPE LD +DR I++LKIE+EALK E D SK RL LEKEL GLE Sbjct: 394 LVDEAASRLRMQVDSKPEALDEIDRRIMQLKIEREALKVETDDASKDRLVRLEKELVGLE 453 Query: 371 ERSTALTARWSAEKNKLSNAQKLKSELDALRVELANAQRKGEFQKAGELAYGRIPELERK 430 E ST +TA+W AEK KL A LK +LD R ELA AQRKGEFQ+AGELAYG+IPELE+K Sbjct: 454 EESTEITAKWQAEKQKLGLAADLKKQLDEARNELAIAQRKGEFQRAGELAYGKIPELEKK 513 Query: 431 LADIEAQENSKPNGGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKDKLLKMEDSLARR 490 L + EAQ+ M+EE VT +H+A +VSRWTG+PVDKML+GE+DKLL+MED + +R Sbjct: 514 LKEAEAQDGK----AGMVEEVVTPDHVAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGKR 569 Query: 491 VVGQAEAVRAVATAVRRARAGLQDPNRPTGSFMFLLP 527 VVGQ EAV+AV+ AVRRARAGLQDPNRP GSF+FL P Sbjct: 570 VVGQGEAVQAVSKAVRRARAGLQDPNRPIGSFIFLGP 606 Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/138 (62%), Positives = 103/138 (74%), Gaps = 1/138 (0%) Query: 5 HQQFSPLHLLKVLLDDNEGLAGGLIDRAGGNSRAILKATEEALNKLPKVSGNGAGQVYLS 64 HQQF+P H+LKVL+DD+EGLA LI+RAGGN R + E AL +PKV G G GQ+YL+ Sbjct: 26 HQQFTPEHILKVLVDDDEGLAASLIERAGGNVRDVKLGVETALEAMPKVEG-GNGQLYLA 84 Query: 65 PELARAFDAAEKAADKAGDSFVTVERLLLGLTLEKGSEAASILSKGGVTAQNLNAAIEAL 124 LA+ F AE+ A KAGDSFVTVERLL LT+EK ++ A IL+K GVTAQ LN I + Sbjct: 85 QPLAKVFSTAEELAKKAGDSFVTVERLLQALTMEKSAKTADILAKAGVTAQALNQVINDV 144 Query: 125 RKGRTADSATAENAYDAL 142 RKGRTADSA+AE YDAL Sbjct: 145 RKGRTADSASAEQNYDAL 162