BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0002.p         (107 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr6185 [S] COG5489 Uncharacterized conserved protein Mlo Mesorh...   154   6e-38
SMa0922 [S] COG5489 Uncharacterized conserved protein Sme Sinorh...    75   5e-14

>mlr6185 [S] COG5489 Uncharacterized conserved protein Mlo Mesorhizobium
           loti
          Length = 107

 Score =  154 bits (388), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 85/107 (79%)

Query: 1   MTAIGFVTRTDNGGYRGELKTLSIRAHIDIVPNSGKSTEAQPDFRIIAQGVEIGAGWIRR 60
           MTAIG+V + +NG Y+G+L+TLS+RA IDIVPN  KS +  PDFR++ QGVE+GAGWIR 
Sbjct: 1   MTAIGYVNKQENGSYKGQLRTLSVRADIDIVPNRSKSADNHPDFRVLTQGVEVGAGWIRT 60

Query: 61  GESSGKDCVSLSLAAPELGSRKLYANLGRAVGLGDDNGFFLIWNPGD 107
           GE+SG D VSLS+AAPE G RKLYANLGRA G  D + + +IWNP D
Sbjct: 61  GETSGNDYVSLSIAAPEFGPRKLYANLGRAAGQDDQDTYAVIWNPAD 107


>SMa0922 [S] COG5489 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 122

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 5/108 (4%)

Query: 2   TAIGFVTRTDNGGYRGELKTLSIRAHIDIVPNSGKSTEAQPDFRIIAQ--GVEIGAGWIR 59
           T I  +T+  +G   G   T+ + A I I+PN+ KS+E  PD+R+I +  G EIGAGW R
Sbjct: 18  TTIATLTQKTDGILEGVFATIRVNAPIAIIPNASKSSEEAPDYRVIHRKTGFEIGAGWNR 77

Query: 60  RGESSGKDCVSLSLAAPELGSRKLYANLGRAVGLGDDNGFFLIWNPGD 107
               +G++ +S+ L APE+G   ++ NL  A G GD +   ++WN  D
Sbjct: 78  IARQTGEEYLSVKLEAPEIGV--IFGNLAPAPG-GDPSKKVILWNNPD 122