BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0004.p (100 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr2150 [S] COG1598 Uncharacterized conserved protein Mlo Mesorh... 67 7e-12 SMc04269 [S] COG1598 Uncharacterized conserved protein Sme Sinor... 60 1e-09 >mlr2150 [S] COG1598 Uncharacterized conserved protein Mlo Mesorhizobium loti Length = 133 Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 3/88 (3%) Query: 5 LAHYVAII-EDAGPDYAVGVWFPDLPGCTSAGDDIDEALRNAPEALKLYAEGLRDDGQEL 63 + Y+ +I +DAG D+ GV FPD PG +AG D+D+A A EAL L+ EGL +DG+ + Sbjct: 1 MKQYIGLIHKDAGSDF--GVSFPDFPGVITAGKDLDDARSMAEEALTLHIEGLVEDGEAI 58 Query: 64 PRPRTLTELKADPEVADDLKTYMVALVE 91 P P +L + AD + D + + A E Sbjct: 59 PEPSSLQAVMADADNRDGVAILVAAKTE 86 >SMc04269 [S] COG1598 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 153 Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 3/77 (3%) Query: 5 LAHYVAII-EDAGPDYAVGVWFPDLPGCTSAGDDIDEALRNAPEALKLYAEGLRDDGQEL 63 + +Y+ +I +DA DY GV FPD G +AG D+D+A A EAL L+ EGL +DG+ + Sbjct: 1 MRNYIGLIHKDAESDY--GVSFPDFSGVVTAGADLDDARAMAEEALALHIEGLVEDGEAI 58 Query: 64 PRPRTLTELKADPEVAD 80 P P +L + +D E D Sbjct: 59 PEPSSLEVVMSDAENRD 75