BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0002.p         (155 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1350 [S] COG3832 Uncharacterized conserved protein Rso Ralsto...   134   6e-32
RSp1319 [S] COG3832 Uncharacterized conserved protein Rso Ralsto...   134   6e-32

>RSp1350 [S] COG3832 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 160

 Score =  134 bits (338), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 1/147 (0%)

Query: 1   MPKPEFAYVTYIETTPEKLWDALTRSTFTRQYWFDTELQSDWKVGSPLALVMG-GKTTDT 59
           M +  F YVTYI TTP+ LW ALT + F +QYWF    +S W  GS   LV G G+  DT
Sbjct: 1   MTRSTFVYVTYIRTTPQTLWSALTDAEFMKQYWFGMHCESQWTAGSAWRLVSGDGQVFDT 60

Query: 60  GEILEADRPRRLAYTFKHVLDEDMRKEPATKVVFTLEAHGKIVKLTVTHEGFGAGSKLLD 119
           GEI+EAD PRRL   + H    +++ E A++    LE  G  VKL++TH      SKL++
Sbjct: 61  GEIVEADPPRRLVIRWLHQSRPELKAEGASQCTMELEPTGTAVKLSITHTIEREASKLIE 120

Query: 120 GISKGWPAILSGLKSLLETGKAVTIPP 146
            +S GWP ILS LKSLLETG      P
Sbjct: 121 AVSGGWPKILSNLKSLLETGSIALQAP 147


>RSp1319 [S] COG3832 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 160

 Score =  134 bits (338), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 1/147 (0%)

Query: 1   MPKPEFAYVTYIETTPEKLWDALTRSTFTRQYWFDTELQSDWKVGSPLALVMG-GKTTDT 59
           M +  F YVTYI TTP+ LW ALT + F +QYWF    +S W  GS   LV G G+  DT
Sbjct: 1   MTRSTFVYVTYIRTTPQTLWSALTDAEFMKQYWFGMHCESQWTAGSAWRLVSGDGQVFDT 60

Query: 60  GEILEADRPRRLAYTFKHVLDEDMRKEPATKVVFTLEAHGKIVKLTVTHEGFGAGSKLLD 119
           GEI+EAD PRRL   + H    +++ E A++    LE  G  VKL++TH      SKL++
Sbjct: 61  GEIVEADPPRRLVIRWLHQSRPELKAEGASQCTMELEPTGTAVKLSITHTIEREASKLIE 120

Query: 120 GISKGWPAILSGLKSLLETGKAVTIPP 146
            +S GWP ILS LKSLLETG      P
Sbjct: 121 AVSGGWPKILSNLKSLLETGSIALQAP 147